Gene : AT5G20500 A. thaliana TAIR10
Defline:  (1 of 1) PTHR10168//PTHR10168:SF112 - GLUTAREDOXIN // GLUTAREDOXIN-C4 Genomic Order:  1986
Name:  ? AT5G20500 Secondary Identifier:  ? PAC:19670170
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana THIOREDOX-PWY Arabidopsis thaliana pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G20500 0.5kb upstream 0.5kb upstream 1751 true Chr5: 6938098-6939848 Arabidopsis thaliana
AT5G20500 0.5kb upstream 0.5kb upstream 500 false Chr5: 6938098-6938597 Arabidopsis thaliana
AT5G20500 0.5kb downstream 0.5kb downstream 1751 true Chr5: 6938598-6940348 Arabidopsis thaliana
AT5G20500 0.5kb downstream 0.5kb downstream 500 false Chr5: 6939849-6940348 Arabidopsis thaliana
AT5G20500 1.0kb upstream 1.0kb upstream 2251 true Chr5: 6937598-6939848 Arabidopsis thaliana
AT5G20500 1.0kb upstream 1.0kb upstream 1000 false Chr5: 6937598-6938597 Arabidopsis thaliana
AT5G20500 1.0kb downstream 1.0kb downstream 2251 true Chr5: 6938598-6940848 Arabidopsis thaliana
AT5G20500 1.0kb downstream 1.0kb downstream 1000 false Chr5: 6939849-6940848 Arabidopsis thaliana
AT5G20500 2.0kb upstream 2.0kb upstream 3251 true Chr5: 6936598-6939848 Arabidopsis thaliana
AT5G20500 2.0kb upstream 2.0kb upstream 2000 false Chr5: 6936598-6938597 Arabidopsis thaliana
AT5G20500 2.0kb downstream 2.0kb downstream 3251 true Chr5: 6938598-6941848 Arabidopsis thaliana
AT5G20500 2.0kb downstream 2.0kb downstream 2000 false Chr5: 6939849-6941848 Arabidopsis thaliana
AT5G20500 5.0kb upstream 5.0kb upstream 6251 true Chr5: 6933598-6939848 Arabidopsis thaliana
AT5G20500 5.0kb upstream 5.0kb upstream 5000 false Chr5: 6933598-6938597 Arabidopsis thaliana
AT5G20500 5.0kb downstream 5.0kb downstream 6251 true Chr5: 6938598-6944848 Arabidopsis thaliana
AT5G20500 5.0kb downstream 5.0kb downstream 5000 false Chr5: 6939849-6944848 Arabidopsis thaliana
AT5G20500 10.0kb upstream 10.0kb upstream 11251 true Chr5: 6928598-6939848 Arabidopsis thaliana
AT5G20500 10.0kb upstream 10.0kb upstream 10000 false Chr5: 6928598-6938597 Arabidopsis thaliana
AT5G20500 10.0kb downstream 10.0kb downstream 11251 true Chr5: 6938598-6949848 Arabidopsis thaliana
AT5G20500 10.0kb downstream 10.0kb downstream 10000 false Chr5: 6939849-6949848 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364139 5261 Brassicaceae View MSA
123830349 5264 Brassicales-Malvales View MSA
124321666 5266 SBM View MSA
124251617 5268 Malvidae View MSA
124064046 5270 Rosid View MSA
123741506 5271 Pentapetalae View MSA
122793687 5272 Eudicot View MSA
122043796 5273 Angiosperm View MSA
121344746 5274 Embryophyte View MSA
123428660 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 53.598     High  
cufflinks 62.811     High  
cufflinks 45.741     High Low
cufflinks 65.087     High  
cufflinks 43.503     High Low
cufflinks 68.734     High High

0 Strain