Gene : RAN2 A. thaliana TAIR10
Primary Identifier:  ? AT5G20020 Defline:  (1 of 2) PTHR24071//PTHR24071:SF7 - FAMILY NOT NAMED // GTP-BINDING NUCLEAR PROTEIN RAN-2
Genomic Order:  1935 Name:  ? AT5G20020
Secondary Identifier:  ? PAC:19670233
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Ontology Annotation Displayer

9 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana ILEUDEG-PWY Arabidopsis thaliana pathologic  
Athaliana PWY-5136 Arabidopsis thaliana pathologic  
Athaliana PWY-5138 Arabidopsis thaliana pathologic  
Athaliana PWY-561 Arabidopsis thaliana pathologic  
Athaliana PWY-6435 Arabidopsis thaliana pathologic  
Athaliana PWY-7036 Arabidopsis thaliana pathologic  
Athaliana PWY-735 Arabidopsis thaliana pathologic  
Athaliana PWY-7606 Arabidopsis thaliana pathologic  
Athaliana VALDEG-PWY Arabidopsis thaliana pathologic  

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G20020 0.5kb upstream 0.5kb upstream 2448 true Chr5: 6762224-6764671 Arabidopsis thaliana
AT5G20020 0.5kb upstream 0.5kb upstream 500 false Chr5: 6762224-6762723 Arabidopsis thaliana
AT5G20020 0.5kb downstream 0.5kb downstream 2448 true Chr5: 6762724-6765171 Arabidopsis thaliana
AT5G20020 0.5kb downstream 0.5kb downstream 500 false Chr5: 6764672-6765171 Arabidopsis thaliana
AT5G20020 1.0kb upstream 1.0kb upstream 2948 true Chr5: 6761724-6764671 Arabidopsis thaliana
AT5G20020 1.0kb upstream 1.0kb upstream 1000 false Chr5: 6761724-6762723 Arabidopsis thaliana
AT5G20020 1.0kb downstream 1.0kb downstream 2948 true Chr5: 6762724-6765671 Arabidopsis thaliana
AT5G20020 1.0kb downstream 1.0kb downstream 1000 false Chr5: 6764672-6765671 Arabidopsis thaliana
AT5G20020 2.0kb upstream 2.0kb upstream 3948 true Chr5: 6760724-6764671 Arabidopsis thaliana
AT5G20020 2.0kb upstream 2.0kb upstream 2000 false Chr5: 6760724-6762723 Arabidopsis thaliana
AT5G20020 2.0kb downstream 2.0kb downstream 3948 true Chr5: 6762724-6766671 Arabidopsis thaliana
AT5G20020 2.0kb downstream 2.0kb downstream 2000 false Chr5: 6764672-6766671 Arabidopsis thaliana
AT5G20020 5.0kb upstream 5.0kb upstream 6948 true Chr5: 6757724-6764671 Arabidopsis thaliana
AT5G20020 5.0kb upstream 5.0kb upstream 5000 false Chr5: 6757724-6762723 Arabidopsis thaliana
AT5G20020 5.0kb downstream 5.0kb downstream 6948 true Chr5: 6762724-6769671 Arabidopsis thaliana
AT5G20020 5.0kb downstream 5.0kb downstream 5000 false Chr5: 6764672-6769671 Arabidopsis thaliana
AT5G20020 10.0kb upstream 10.0kb upstream 11948 true Chr5: 6752724-6764671 Arabidopsis thaliana
AT5G20020 10.0kb upstream 10.0kb upstream 10000 false Chr5: 6752724-6762723 Arabidopsis thaliana
AT5G20020 10.0kb downstream 10.0kb downstream 11948 true Chr5: 6762724-6774671 Arabidopsis thaliana
AT5G20020 10.0kb downstream 10.0kb downstream 10000 false Chr5: 6764672-6774671 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371036 5261 Brassicaceae View MSA
123829338 5264 Brassicales-Malvales View MSA
124347070 5266 SBM View MSA
124237166 5268 Malvidae View MSA
124073929 5270 Rosid View MSA
123749309 5271 Pentapetalae View MSA
122790069 5272 Eudicot View MSA
122051651 5273 Angiosperm View MSA
121349425 5274 Embryophyte View MSA
123424763 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 70.86     High  
cufflinks 93.554     High  
cufflinks 61.996     High  
cufflinks 98.732     High  
cufflinks 57.293     High Low
cufflinks 105.158     High High

0 Strain