Gene : AT5G19940 A. thaliana TAIR10
Defline:  (1 of 14) PF04755 - PAP_fibrillin (PAP_fibrillin) Genomic Order:  1927
Name:  ? AT5G19940 Secondary Identifier:  ? PAC:19666312
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G19940 0.5kb upstream 0.5kb upstream 1834 true Chr5: 6739124-6740957 Arabidopsis thaliana
AT5G19940 0.5kb upstream 0.5kb upstream 500 false Chr5: 6739124-6739623 Arabidopsis thaliana
AT5G19940 0.5kb downstream 0.5kb downstream 1834 true Chr5: 6739624-6741457 Arabidopsis thaliana
AT5G19940 0.5kb downstream 0.5kb downstream 500 false Chr5: 6740958-6741457 Arabidopsis thaliana
AT5G19940 1.0kb upstream 1.0kb upstream 2334 true Chr5: 6738624-6740957 Arabidopsis thaliana
AT5G19940 1.0kb upstream 1.0kb upstream 1000 false Chr5: 6738624-6739623 Arabidopsis thaliana
AT5G19940 1.0kb downstream 1.0kb downstream 2334 true Chr5: 6739624-6741957 Arabidopsis thaliana
AT5G19940 1.0kb downstream 1.0kb downstream 1000 false Chr5: 6740958-6741957 Arabidopsis thaliana
AT5G19940 2.0kb upstream 2.0kb upstream 3334 true Chr5: 6737624-6740957 Arabidopsis thaliana
AT5G19940 2.0kb upstream 2.0kb upstream 2000 false Chr5: 6737624-6739623 Arabidopsis thaliana
AT5G19940 2.0kb downstream 2.0kb downstream 3334 true Chr5: 6739624-6742957 Arabidopsis thaliana
AT5G19940 2.0kb downstream 2.0kb downstream 2000 false Chr5: 6740958-6742957 Arabidopsis thaliana
AT5G19940 5.0kb upstream 5.0kb upstream 6334 true Chr5: 6734624-6740957 Arabidopsis thaliana
AT5G19940 5.0kb upstream 5.0kb upstream 5000 false Chr5: 6734624-6739623 Arabidopsis thaliana
AT5G19940 5.0kb downstream 5.0kb downstream 6334 true Chr5: 6739624-6745957 Arabidopsis thaliana
AT5G19940 5.0kb downstream 5.0kb downstream 5000 false Chr5: 6740958-6745957 Arabidopsis thaliana
AT5G19940 10.0kb upstream 10.0kb upstream 11334 true Chr5: 6729624-6740957 Arabidopsis thaliana
AT5G19940 10.0kb upstream 10.0kb upstream 10000 false Chr5: 6729624-6739623 Arabidopsis thaliana
AT5G19940 10.0kb downstream 10.0kb downstream 11334 true Chr5: 6739624-6750957 Arabidopsis thaliana
AT5G19940 10.0kb downstream 10.0kb downstream 10000 false Chr5: 6740958-6750957 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371296 5261 Brassicaceae View MSA
123840913 5264 Brassicales-Malvales View MSA
124345308 5266 SBM View MSA
124242865 5268 Malvidae View MSA
124060724 5270 Rosid View MSA
123739839 5271 Pentapetalae View MSA
122789200 5272 Eudicot View MSA
122042948 5273 Angiosperm View MSA
121347076 5274 Embryophyte View MSA
123428085 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 98.487     High  
cufflinks 7.635        
cufflinks 180.901     High High
cufflinks 6.951        
cufflinks 173.016     High  
cufflinks 4.053       Low

0 Strain