Gene : AT5G19870 A. thaliana TAIR10
Defline:  (1 of 3) PTHR16007//PTHR16007:SF29 - EPIDIDYMAL MEMBRANE PROTEIN E9-RELATED // SUBFAMILY NOT NAMED Genomic Order:  1919
Name:  ? AT5G19870 Secondary Identifier:  ? PAC:19670277
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G19870 0.5kb upstream 0.5kb upstream 1538 true Chr5: 6716073-6717610 Arabidopsis thaliana
AT5G19870 0.5kb upstream 0.5kb upstream 500 false Chr5: 6717111-6717610 Arabidopsis thaliana
AT5G19870 0.5kb downstream 0.5kb downstream 1538 true Chr5: 6715573-6717110 Arabidopsis thaliana
AT5G19870 0.5kb downstream 0.5kb downstream 500 false Chr5: 6715573-6716072 Arabidopsis thaliana
AT5G19870 1.0kb upstream 1.0kb upstream 2038 true Chr5: 6716073-6718110 Arabidopsis thaliana
AT5G19870 1.0kb upstream 1.0kb upstream 1000 false Chr5: 6717111-6718110 Arabidopsis thaliana
AT5G19870 1.0kb downstream 1.0kb downstream 2038 true Chr5: 6715073-6717110 Arabidopsis thaliana
AT5G19870 1.0kb downstream 1.0kb downstream 1000 false Chr5: 6715073-6716072 Arabidopsis thaliana
AT5G19870 2.0kb upstream 2.0kb upstream 3038 true Chr5: 6716073-6719110 Arabidopsis thaliana
AT5G19870 2.0kb upstream 2.0kb upstream 2000 false Chr5: 6717111-6719110 Arabidopsis thaliana
AT5G19870 2.0kb downstream 2.0kb downstream 3038 true Chr5: 6714073-6717110 Arabidopsis thaliana
AT5G19870 2.0kb downstream 2.0kb downstream 2000 false Chr5: 6714073-6716072 Arabidopsis thaliana
AT5G19870 5.0kb upstream 5.0kb upstream 6038 true Chr5: 6716073-6722110 Arabidopsis thaliana
AT5G19870 5.0kb upstream 5.0kb upstream 5000 false Chr5: 6717111-6722110 Arabidopsis thaliana
AT5G19870 5.0kb downstream 5.0kb downstream 6038 true Chr5: 6711073-6717110 Arabidopsis thaliana
AT5G19870 5.0kb downstream 5.0kb downstream 5000 false Chr5: 6711073-6716072 Arabidopsis thaliana
AT5G19870 10.0kb upstream 10.0kb upstream 11038 true Chr5: 6716073-6727110 Arabidopsis thaliana
AT5G19870 10.0kb upstream 10.0kb upstream 10000 false Chr5: 6717111-6727110 Arabidopsis thaliana
AT5G19870 10.0kb downstream 10.0kb downstream 11038 true Chr5: 6706073-6717110 Arabidopsis thaliana
AT5G19870 10.0kb downstream 10.0kb downstream 10000 false Chr5: 6706073-6716072 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364230 5261 Brassicaceae View MSA
123837773 5264 Brassicales-Malvales View MSA
124350524 5266 SBM View MSA
124243278 5268 Malvidae View MSA
124068390 5270 Rosid View MSA
123738085 5271 Pentapetalae View MSA
122788198 5272 Eudicot View MSA
122043341 5273 Angiosperm View MSA
121350277 5274 Embryophyte View MSA
123426219 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.609        
cufflinks 2.982        
cufflinks 0.555        
cufflinks 3.813        
cufflinks 0.35       Low
cufflinks 6.034       High

0 Strain