Gene : AT5G19390 A. thaliana TAIR10
Defline:  (1 of 1) KOG4271 - Rho-GTPase activating protein Genomic Order:  1867
Name:  ? AT5G19390 Secondary Identifier:  ? PAC:19671865
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G19390 0.5kb upstream 0.5kb upstream 7446 true Chr5: 6531038-6538483 Arabidopsis thaliana
AT5G19390 0.5kb upstream 0.5kb upstream 500 false Chr5: 6531038-6531537 Arabidopsis thaliana
AT5G19390 0.5kb downstream 0.5kb downstream 7446 true Chr5: 6531538-6538983 Arabidopsis thaliana
AT5G19390 0.5kb downstream 0.5kb downstream 500 false Chr5: 6538484-6538983 Arabidopsis thaliana
AT5G19390 1.0kb upstream 1.0kb upstream 7946 true Chr5: 6530538-6538483 Arabidopsis thaliana
AT5G19390 1.0kb upstream 1.0kb upstream 1000 false Chr5: 6530538-6531537 Arabidopsis thaliana
AT5G19390 1.0kb downstream 1.0kb downstream 7946 true Chr5: 6531538-6539483 Arabidopsis thaliana
AT5G19390 1.0kb downstream 1.0kb downstream 1000 false Chr5: 6538484-6539483 Arabidopsis thaliana
AT5G19390 2.0kb upstream 2.0kb upstream 8946 true Chr5: 6529538-6538483 Arabidopsis thaliana
AT5G19390 2.0kb upstream 2.0kb upstream 2000 false Chr5: 6529538-6531537 Arabidopsis thaliana
AT5G19390 2.0kb downstream 2.0kb downstream 8946 true Chr5: 6531538-6540483 Arabidopsis thaliana
AT5G19390 2.0kb downstream 2.0kb downstream 2000 false Chr5: 6538484-6540483 Arabidopsis thaliana
AT5G19390 5.0kb upstream 5.0kb upstream 11946 true Chr5: 6526538-6538483 Arabidopsis thaliana
AT5G19390 5.0kb upstream 5.0kb upstream 5000 false Chr5: 6526538-6531537 Arabidopsis thaliana
AT5G19390 5.0kb downstream 5.0kb downstream 11946 true Chr5: 6531538-6543483 Arabidopsis thaliana
AT5G19390 5.0kb downstream 5.0kb downstream 5000 false Chr5: 6538484-6543483 Arabidopsis thaliana
AT5G19390 10.0kb upstream 10.0kb upstream 16946 true Chr5: 6521538-6538483 Arabidopsis thaliana
AT5G19390 10.0kb upstream 10.0kb upstream 10000 false Chr5: 6521538-6531537 Arabidopsis thaliana
AT5G19390 10.0kb downstream 10.0kb downstream 16946 true Chr5: 6531538-6548483 Arabidopsis thaliana
AT5G19390 10.0kb downstream 10.0kb downstream 10000 false Chr5: 6538484-6548483 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363794 5261 Brassicaceae View MSA
123831692 5264 Brassicales-Malvales View MSA
124343857 5266 SBM View MSA
124252587 5268 Malvidae View MSA
124067310 5270 Rosid View MSA
123749156 5271 Pentapetalae View MSA
122794752 5272 Eudicot View MSA
122042223 5273 Angiosperm View MSA
121347338 5274 Embryophyte View MSA
123380531 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.121        
cufflinks 3.353        
cufflinks 2.363        
cufflinks 3.451        
cufflinks 1.914       Low
cufflinks 4.106       High

0 Strain