Gene : AT5G19440 A. thaliana TAIR10
Defline:  (1 of 6) PTHR10366:SF362 - ALCOHOL DEHYDROGENASE-RELATED Genomic Order:  1872
Name:  ? AT5G19440 Secondary Identifier:  ? PAC:19668608
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-361 Arabidopsis thaliana pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G19440 0.5kb upstream 0.5kb upstream 2423 true Chr5: 6555920-6558342 Arabidopsis thaliana
AT5G19440 0.5kb upstream 0.5kb upstream 500 false Chr5: 6555920-6556419 Arabidopsis thaliana
AT5G19440 0.5kb downstream 0.5kb downstream 2423 true Chr5: 6556420-6558842 Arabidopsis thaliana
AT5G19440 0.5kb downstream 0.5kb downstream 500 false Chr5: 6558343-6558842 Arabidopsis thaliana
AT5G19440 1.0kb upstream 1.0kb upstream 2923 true Chr5: 6555420-6558342 Arabidopsis thaliana
AT5G19440 1.0kb upstream 1.0kb upstream 1000 false Chr5: 6555420-6556419 Arabidopsis thaliana
AT5G19440 1.0kb downstream 1.0kb downstream 2923 true Chr5: 6556420-6559342 Arabidopsis thaliana
AT5G19440 1.0kb downstream 1.0kb downstream 1000 false Chr5: 6558343-6559342 Arabidopsis thaliana
AT5G19440 2.0kb upstream 2.0kb upstream 3923 true Chr5: 6554420-6558342 Arabidopsis thaliana
AT5G19440 2.0kb upstream 2.0kb upstream 2000 false Chr5: 6554420-6556419 Arabidopsis thaliana
AT5G19440 2.0kb downstream 2.0kb downstream 3923 true Chr5: 6556420-6560342 Arabidopsis thaliana
AT5G19440 2.0kb downstream 2.0kb downstream 2000 false Chr5: 6558343-6560342 Arabidopsis thaliana
AT5G19440 5.0kb upstream 5.0kb upstream 6923 true Chr5: 6551420-6558342 Arabidopsis thaliana
AT5G19440 5.0kb upstream 5.0kb upstream 5000 false Chr5: 6551420-6556419 Arabidopsis thaliana
AT5G19440 5.0kb downstream 5.0kb downstream 6923 true Chr5: 6556420-6563342 Arabidopsis thaliana
AT5G19440 5.0kb downstream 5.0kb downstream 5000 false Chr5: 6558343-6563342 Arabidopsis thaliana
AT5G19440 10.0kb upstream 10.0kb upstream 11923 true Chr5: 6546420-6558342 Arabidopsis thaliana
AT5G19440 10.0kb upstream 10.0kb upstream 10000 false Chr5: 6546420-6556419 Arabidopsis thaliana
AT5G19440 10.0kb downstream 10.0kb downstream 11923 true Chr5: 6556420-6568342 Arabidopsis thaliana
AT5G19440 10.0kb downstream 10.0kb downstream 10000 false Chr5: 6558343-6568342 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364957 5261 Brassicaceae View MSA
123837668 5264 Brassicales-Malvales View MSA
124343860 5266 SBM View MSA
124238633 5268 Malvidae View MSA
124067100 5270 Rosid View MSA
123752094 5271 Pentapetalae View MSA
122797549 5272 Eudicot View MSA
122050735 5273 Angiosperm View MSA
121350507 5274 Embryophyte View MSA
123428289 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 31.785     High Low
cufflinks 42.008     High  
cufflinks 37.793     High  
cufflinks 68.164     High High
cufflinks 51.773     High  
cufflinks 42.185     High  

0 Strain