Gene : AKINBETA1 A. thaliana TAIR10
Primary Identifier:  ? AT5G21170 Defline:  (1 of 2) K07199 - 5'-AMP-activated protein kinase, regulatory beta subunit (PRKAB)
Genomic Order:  2052 Name:  ? AT5G21170
Secondary Identifier:  ? PAC:19666343
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G21170 0.5kb upstream 0.5kb upstream 3435 true Chr5: 7205062-7208496 Arabidopsis thaliana
AT5G21170 0.5kb upstream 0.5kb upstream 500 false Chr5: 7205062-7205561 Arabidopsis thaliana
AT5G21170 0.5kb downstream 0.5kb downstream 3435 true Chr5: 7205562-7208996 Arabidopsis thaliana
AT5G21170 0.5kb downstream 0.5kb downstream 500 false Chr5: 7208497-7208996 Arabidopsis thaliana
AT5G21170 1.0kb upstream 1.0kb upstream 3935 true Chr5: 7204562-7208496 Arabidopsis thaliana
AT5G21170 1.0kb upstream 1.0kb upstream 1000 false Chr5: 7204562-7205561 Arabidopsis thaliana
AT5G21170 1.0kb downstream 1.0kb downstream 3935 true Chr5: 7205562-7209496 Arabidopsis thaliana
AT5G21170 1.0kb downstream 1.0kb downstream 1000 false Chr5: 7208497-7209496 Arabidopsis thaliana
AT5G21170 2.0kb upstream 2.0kb upstream 4935 true Chr5: 7203562-7208496 Arabidopsis thaliana
AT5G21170 2.0kb upstream 2.0kb upstream 2000 false Chr5: 7203562-7205561 Arabidopsis thaliana
AT5G21170 2.0kb downstream 2.0kb downstream 4935 true Chr5: 7205562-7210496 Arabidopsis thaliana
AT5G21170 2.0kb downstream 2.0kb downstream 2000 false Chr5: 7208497-7210496 Arabidopsis thaliana
AT5G21170 5.0kb upstream 5.0kb upstream 7935 true Chr5: 7200562-7208496 Arabidopsis thaliana
AT5G21170 5.0kb upstream 5.0kb upstream 5000 false Chr5: 7200562-7205561 Arabidopsis thaliana
AT5G21170 5.0kb downstream 5.0kb downstream 7935 true Chr5: 7205562-7213496 Arabidopsis thaliana
AT5G21170 5.0kb downstream 5.0kb downstream 5000 false Chr5: 7208497-7213496 Arabidopsis thaliana
AT5G21170 10.0kb upstream 10.0kb upstream 12935 true Chr5: 7195562-7208496 Arabidopsis thaliana
AT5G21170 10.0kb upstream 10.0kb upstream 10000 false Chr5: 7195562-7205561 Arabidopsis thaliana
AT5G21170 10.0kb downstream 10.0kb downstream 12935 true Chr5: 7205562-7218496 Arabidopsis thaliana
AT5G21170 10.0kb downstream 10.0kb downstream 10000 false Chr5: 7208497-7218496 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365436 5261 Brassicaceae View MSA
123841010 5264 Brassicales-Malvales View MSA
124339710 5266 SBM View MSA
124245123 5268 Malvidae View MSA
124068793 5270 Rosid View MSA
123737667 5271 Pentapetalae View MSA
122785894 5272 Eudicot View MSA
122041753 5273 Angiosperm View MSA
121345261 5274 Embryophyte View MSA
123426874 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.459        
cufflinks 5.843        
cufflinks 12.25        
cufflinks 6.065        
cufflinks 14.84       High
cufflinks 4.354       Low

0 Strain