Gene : AT5G21100 A. thaliana TAIR10
Defline:  (1 of 3) 1.10.3.2//1.10.3.3 - Laccase / Urishiol oxidase // L-ascorbate oxidase / Ascorbase Genomic Order:  2043
Name:  ? AT5G21100 Secondary Identifier:  ? PAC:19671390
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-5466 Arabidopsis thaliana pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G21100 0.5kb upstream 0.5kb upstream 3245 true Chr5: 7167684-7170928 Arabidopsis thaliana
AT5G21100 0.5kb upstream 0.5kb upstream 500 false Chr5: 7167684-7168183 Arabidopsis thaliana
AT5G21100 0.5kb downstream 0.5kb downstream 3245 true Chr5: 7168184-7171428 Arabidopsis thaliana
AT5G21100 0.5kb downstream 0.5kb downstream 500 false Chr5: 7170929-7171428 Arabidopsis thaliana
AT5G21100 1.0kb upstream 1.0kb upstream 3745 true Chr5: 7167184-7170928 Arabidopsis thaliana
AT5G21100 1.0kb upstream 1.0kb upstream 1000 false Chr5: 7167184-7168183 Arabidopsis thaliana
AT5G21100 1.0kb downstream 1.0kb downstream 3745 true Chr5: 7168184-7171928 Arabidopsis thaliana
AT5G21100 1.0kb downstream 1.0kb downstream 1000 false Chr5: 7170929-7171928 Arabidopsis thaliana
AT5G21100 2.0kb upstream 2.0kb upstream 4745 true Chr5: 7166184-7170928 Arabidopsis thaliana
AT5G21100 2.0kb upstream 2.0kb upstream 2000 false Chr5: 7166184-7168183 Arabidopsis thaliana
AT5G21100 2.0kb downstream 2.0kb downstream 4745 true Chr5: 7168184-7172928 Arabidopsis thaliana
AT5G21100 2.0kb downstream 2.0kb downstream 2000 false Chr5: 7170929-7172928 Arabidopsis thaliana
AT5G21100 5.0kb upstream 5.0kb upstream 7745 true Chr5: 7163184-7170928 Arabidopsis thaliana
AT5G21100 5.0kb upstream 5.0kb upstream 5000 false Chr5: 7163184-7168183 Arabidopsis thaliana
AT5G21100 5.0kb downstream 5.0kb downstream 7745 true Chr5: 7168184-7175928 Arabidopsis thaliana
AT5G21100 5.0kb downstream 5.0kb downstream 5000 false Chr5: 7170929-7175928 Arabidopsis thaliana
AT5G21100 10.0kb upstream 10.0kb upstream 12745 true Chr5: 7158184-7170928 Arabidopsis thaliana
AT5G21100 10.0kb upstream 10.0kb upstream 10000 false Chr5: 7158184-7168183 Arabidopsis thaliana
AT5G21100 10.0kb downstream 10.0kb downstream 12745 true Chr5: 7168184-7180928 Arabidopsis thaliana
AT5G21100 10.0kb downstream 10.0kb downstream 10000 false Chr5: 7170929-7180928 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378805 5261 Brassicaceae View MSA
123833717 5264 Brassicales-Malvales View MSA
124345960 5266 SBM View MSA
124242073 5268 Malvidae View MSA
124063404 5270 Rosid View MSA
123739714 5271 Pentapetalae View MSA
122791263 5272 Eudicot View MSA
122042920 5273 Angiosperm View MSA
121348734 5274 Embryophyte View MSA
123428014 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.318        
cufflinks 0.398       Low
cufflinks 11.363        
cufflinks 0.604        
cufflinks 7.071        
cufflinks 0.866        

0 Strain