Gene : BPM5 A. thaliana TAIR10
Primary Identifier:  ? AT5G21010 Defline:  (1 of 5) PTHR24411//PTHR24411:SF35 - FAMILY NOT NAMED // BTB/POZ AND MATH DOMAIN-CONTAINING PROTEIN 1-RELATED
Genomic Order:  2034 Name:  ? AT5G21010
Secondary Identifier:  ? PAC:19666218
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G21010 0.5kb upstream 0.5kb upstream 3173 true Chr5: 7135509-7138681 Arabidopsis thaliana
AT5G21010 0.5kb upstream 0.5kb upstream 500 false Chr5: 7135509-7136008 Arabidopsis thaliana
AT5G21010 0.5kb downstream 0.5kb downstream 3173 true Chr5: 7136009-7139181 Arabidopsis thaliana
AT5G21010 0.5kb downstream 0.5kb downstream 500 false Chr5: 7138682-7139181 Arabidopsis thaliana
AT5G21010 1.0kb upstream 1.0kb upstream 3673 true Chr5: 7135009-7138681 Arabidopsis thaliana
AT5G21010 1.0kb upstream 1.0kb upstream 1000 false Chr5: 7135009-7136008 Arabidopsis thaliana
AT5G21010 1.0kb downstream 1.0kb downstream 3673 true Chr5: 7136009-7139681 Arabidopsis thaliana
AT5G21010 1.0kb downstream 1.0kb downstream 1000 false Chr5: 7138682-7139681 Arabidopsis thaliana
AT5G21010 2.0kb upstream 2.0kb upstream 4673 true Chr5: 7134009-7138681 Arabidopsis thaliana
AT5G21010 2.0kb upstream 2.0kb upstream 2000 false Chr5: 7134009-7136008 Arabidopsis thaliana
AT5G21010 2.0kb downstream 2.0kb downstream 4673 true Chr5: 7136009-7140681 Arabidopsis thaliana
AT5G21010 2.0kb downstream 2.0kb downstream 2000 false Chr5: 7138682-7140681 Arabidopsis thaliana
AT5G21010 5.0kb upstream 5.0kb upstream 7673 true Chr5: 7131009-7138681 Arabidopsis thaliana
AT5G21010 5.0kb upstream 5.0kb upstream 5000 false Chr5: 7131009-7136008 Arabidopsis thaliana
AT5G21010 5.0kb downstream 5.0kb downstream 7673 true Chr5: 7136009-7143681 Arabidopsis thaliana
AT5G21010 5.0kb downstream 5.0kb downstream 5000 false Chr5: 7138682-7143681 Arabidopsis thaliana
AT5G21010 10.0kb upstream 10.0kb upstream 12673 true Chr5: 7126009-7138681 Arabidopsis thaliana
AT5G21010 10.0kb upstream 10.0kb upstream 10000 false Chr5: 7126009-7136008 Arabidopsis thaliana
AT5G21010 10.0kb downstream 10.0kb downstream 12673 true Chr5: 7136009-7148681 Arabidopsis thaliana
AT5G21010 10.0kb downstream 10.0kb downstream 10000 false Chr5: 7138682-7148681 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041251 5273 Angiosperm View MSA
122368534 5261 Brassicaceae View MSA
123799593 5264 Brassicales-Malvales View MSA
124297095 5266 SBM View MSA
124252110 5268 Malvidae View MSA
124061279 5270 Rosid View MSA
123740523 5271 Pentapetalae View MSA
122790059 5272 Eudicot View MSA
121348457 5274 Embryophyte View MSA
123428082 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.605        
cufflinks 7.408        
cufflinks 6.418       Low
cufflinks 8.41       High
cufflinks 7.254        
cufflinks 7.578        

0 Strain