Gene : AT5G20840 A. thaliana TAIR10
Defline:  (1 of 4) PTHR11200//PTHR11200:SF122 - INOSITOL 5-PHOSPHATASE // PHOSPHOINOSITIDE PHOSPHATASE SAC3-RELATED Genomic Order:  2016
Name:  ? AT5G20840 Secondary Identifier:  ? PAC:19665916
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G20840 0.5kb upstream 0.5kb upstream 8617 true Chr5: 7061103-7069719 Arabidopsis thaliana
AT5G20840 0.5kb upstream 0.5kb upstream 500 false Chr5: 7069220-7069719 Arabidopsis thaliana
AT5G20840 0.5kb downstream 0.5kb downstream 8617 true Chr5: 7060603-7069219 Arabidopsis thaliana
AT5G20840 0.5kb downstream 0.5kb downstream 500 false Chr5: 7060603-7061102 Arabidopsis thaliana
AT5G20840 1.0kb upstream 1.0kb upstream 9117 true Chr5: 7061103-7070219 Arabidopsis thaliana
AT5G20840 1.0kb upstream 1.0kb upstream 1000 false Chr5: 7069220-7070219 Arabidopsis thaliana
AT5G20840 1.0kb downstream 1.0kb downstream 9117 true Chr5: 7060103-7069219 Arabidopsis thaliana
AT5G20840 1.0kb downstream 1.0kb downstream 1000 false Chr5: 7060103-7061102 Arabidopsis thaliana
AT5G20840 2.0kb upstream 2.0kb upstream 10117 true Chr5: 7061103-7071219 Arabidopsis thaliana
AT5G20840 2.0kb upstream 2.0kb upstream 2000 false Chr5: 7069220-7071219 Arabidopsis thaliana
AT5G20840 2.0kb downstream 2.0kb downstream 10117 true Chr5: 7059103-7069219 Arabidopsis thaliana
AT5G20840 2.0kb downstream 2.0kb downstream 2000 false Chr5: 7059103-7061102 Arabidopsis thaliana
AT5G20840 5.0kb upstream 5.0kb upstream 13117 true Chr5: 7061103-7074219 Arabidopsis thaliana
AT5G20840 5.0kb upstream 5.0kb upstream 5000 false Chr5: 7069220-7074219 Arabidopsis thaliana
AT5G20840 5.0kb downstream 5.0kb downstream 13117 true Chr5: 7056103-7069219 Arabidopsis thaliana
AT5G20840 5.0kb downstream 5.0kb downstream 5000 false Chr5: 7056103-7061102 Arabidopsis thaliana
AT5G20840 10.0kb upstream 10.0kb upstream 18117 true Chr5: 7061103-7079219 Arabidopsis thaliana
AT5G20840 10.0kb upstream 10.0kb upstream 10000 false Chr5: 7069220-7079219 Arabidopsis thaliana
AT5G20840 10.0kb downstream 10.0kb downstream 18117 true Chr5: 7051103-7069219 Arabidopsis thaliana
AT5G20840 10.0kb downstream 10.0kb downstream 10000 false Chr5: 7051103-7061102 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041370 5273 Angiosperm View MSA
122380115 5261 Brassicaceae View MSA
123840697 5264 Brassicales-Malvales View MSA
124342228 5266 SBM View MSA
124248342 5268 Malvidae View MSA
124066536 5270 Rosid View MSA
123750284 5271 Pentapetalae View MSA
122786503 5272 Eudicot View MSA
121350498 5274 Embryophyte View MSA
123428410 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.977        
cufflinks 6.835       Low
cufflinks 7.491        
cufflinks 9.808       High
cufflinks 8.513        
cufflinks 9.484        

0 Strain