Gene : AT5G24390 A. thaliana TAIR10
Defline:  (1 of 3) PTHR22957//PTHR22957:SF312 - TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN // RABGAP/TBC DOMAIN-CONTAINING PROTEIN Genomic Order:  2328
Name:  ? AT5G24390 Secondary Identifier:  ? PAC:19668946
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G24390 0.5kb upstream 0.5kb upstream 3384 true Chr5: 8326607-8329990 Arabidopsis thaliana
AT5G24390 0.5kb upstream 0.5kb upstream 500 false Chr5: 8329491-8329990 Arabidopsis thaliana
AT5G24390 0.5kb downstream 0.5kb downstream 3384 true Chr5: 8326107-8329490 Arabidopsis thaliana
AT5G24390 0.5kb downstream 0.5kb downstream 500 false Chr5: 8326107-8326606 Arabidopsis thaliana
AT5G24390 1.0kb upstream 1.0kb upstream 3884 true Chr5: 8326607-8330490 Arabidopsis thaliana
AT5G24390 1.0kb upstream 1.0kb upstream 1000 false Chr5: 8329491-8330490 Arabidopsis thaliana
AT5G24390 1.0kb downstream 1.0kb downstream 3884 true Chr5: 8325607-8329490 Arabidopsis thaliana
AT5G24390 1.0kb downstream 1.0kb downstream 1000 false Chr5: 8325607-8326606 Arabidopsis thaliana
AT5G24390 2.0kb upstream 2.0kb upstream 4884 true Chr5: 8326607-8331490 Arabidopsis thaliana
AT5G24390 2.0kb upstream 2.0kb upstream 2000 false Chr5: 8329491-8331490 Arabidopsis thaliana
AT5G24390 2.0kb downstream 2.0kb downstream 4884 true Chr5: 8324607-8329490 Arabidopsis thaliana
AT5G24390 2.0kb downstream 2.0kb downstream 2000 false Chr5: 8324607-8326606 Arabidopsis thaliana
AT5G24390 5.0kb upstream 5.0kb upstream 7884 true Chr5: 8326607-8334490 Arabidopsis thaliana
AT5G24390 5.0kb upstream 5.0kb upstream 5000 false Chr5: 8329491-8334490 Arabidopsis thaliana
AT5G24390 5.0kb downstream 5.0kb downstream 7884 true Chr5: 8321607-8329490 Arabidopsis thaliana
AT5G24390 5.0kb downstream 5.0kb downstream 5000 false Chr5: 8321607-8326606 Arabidopsis thaliana
AT5G24390 10.0kb upstream 10.0kb upstream 12884 true Chr5: 8326607-8339490 Arabidopsis thaliana
AT5G24390 10.0kb upstream 10.0kb upstream 10000 false Chr5: 8329491-8339490 Arabidopsis thaliana
AT5G24390 10.0kb downstream 10.0kb downstream 12884 true Chr5: 8316607-8329490 Arabidopsis thaliana
AT5G24390 10.0kb downstream 10.0kb downstream 10000 false Chr5: 8316607-8326606 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361041 5261 Brassicaceae View MSA
123798092 5264 Brassicales-Malvales View MSA
124295770 5266 SBM View MSA
124148114 5268 Malvidae View MSA
124062747 5270 Rosid View MSA
123753502 5271 Pentapetalae View MSA
122792404 5272 Eudicot View MSA
122042642 5273 Angiosperm View MSA
121349372 5274 Embryophyte View MSA
123428253 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.35        
cufflinks 8.68        
cufflinks 0.925        
cufflinks 6.479        
cufflinks 0.358       Low
cufflinks 7.342        

0 Strain