Gene : AT5G24490 A. thaliana TAIR10
Defline:  (1 of 1) PTHR33231//PTHR33231:SF1 - FAMILY NOT NAMED // 30S RIBOSOMAL PROTEIN-RELATED Genomic Order:  2338
Name:  ? AT5G24490 Secondary Identifier:  ? PAC:19669038
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G24490 0.5kb upstream 0.5kb upstream 2360 true Chr5: 8365101-8367460 Arabidopsis thaliana
AT5G24490 0.5kb upstream 0.5kb upstream 500 false Chr5: 8365101-8365600 Arabidopsis thaliana
AT5G24490 0.5kb downstream 0.5kb downstream 2360 true Chr5: 8365601-8367960 Arabidopsis thaliana
AT5G24490 0.5kb downstream 0.5kb downstream 500 false Chr5: 8367461-8367960 Arabidopsis thaliana
AT5G24490 1.0kb upstream 1.0kb upstream 2860 true Chr5: 8364601-8367460 Arabidopsis thaliana
AT5G24490 1.0kb upstream 1.0kb upstream 1000 false Chr5: 8364601-8365600 Arabidopsis thaliana
AT5G24490 1.0kb downstream 1.0kb downstream 2860 true Chr5: 8365601-8368460 Arabidopsis thaliana
AT5G24490 1.0kb downstream 1.0kb downstream 1000 false Chr5: 8367461-8368460 Arabidopsis thaliana
AT5G24490 2.0kb upstream 2.0kb upstream 3860 true Chr5: 8363601-8367460 Arabidopsis thaliana
AT5G24490 2.0kb upstream 2.0kb upstream 2000 false Chr5: 8363601-8365600 Arabidopsis thaliana
AT5G24490 2.0kb downstream 2.0kb downstream 3860 true Chr5: 8365601-8369460 Arabidopsis thaliana
AT5G24490 2.0kb downstream 2.0kb downstream 2000 false Chr5: 8367461-8369460 Arabidopsis thaliana
AT5G24490 5.0kb upstream 5.0kb upstream 6860 true Chr5: 8360601-8367460 Arabidopsis thaliana
AT5G24490 5.0kb upstream 5.0kb upstream 5000 false Chr5: 8360601-8365600 Arabidopsis thaliana
AT5G24490 5.0kb downstream 5.0kb downstream 6860 true Chr5: 8365601-8372460 Arabidopsis thaliana
AT5G24490 5.0kb downstream 5.0kb downstream 5000 false Chr5: 8367461-8372460 Arabidopsis thaliana
AT5G24490 10.0kb upstream 10.0kb upstream 11860 true Chr5: 8355601-8367460 Arabidopsis thaliana
AT5G24490 10.0kb upstream 10.0kb upstream 10000 false Chr5: 8355601-8365600 Arabidopsis thaliana
AT5G24490 10.0kb downstream 10.0kb downstream 11860 true Chr5: 8365601-8377460 Arabidopsis thaliana
AT5G24490 10.0kb downstream 10.0kb downstream 10000 false Chr5: 8367461-8377460 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364518 5261 Brassicaceae View MSA
123832507 5264 Brassicales-Malvales View MSA
124341157 5266 SBM View MSA
124238845 5268 Malvidae View MSA
124068833 5270 Rosid View MSA
123738015 5271 Pentapetalae View MSA
122786116 5272 Eudicot View MSA
122044034 5273 Angiosperm View MSA
121345807 5274 Embryophyte View MSA
123423894 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 155.233     High  
cufflinks 18.724        
cufflinks 381.109     High High
cufflinks 21.857        
cufflinks 350.729     High High
cufflinks 10.271       Low

0 Strain