Gene : AT5G23950 A. thaliana TAIR10
Defline:  (1 of 102) PF00168 - C2 domain (C2) Genomic Order:  2274
Name:  ? AT5G23950 Secondary Identifier:  ? PAC:19666369
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G23950 0.5kb upstream 0.5kb upstream 1361 true Chr5: 8082244-8083604 Arabidopsis thaliana
AT5G23950 0.5kb upstream 0.5kb upstream 500 false Chr5: 8082244-8082743 Arabidopsis thaliana
AT5G23950 0.5kb downstream 0.5kb downstream 1361 true Chr5: 8082744-8084104 Arabidopsis thaliana
AT5G23950 0.5kb downstream 0.5kb downstream 500 false Chr5: 8083605-8084104 Arabidopsis thaliana
AT5G23950 1.0kb upstream 1.0kb upstream 1861 true Chr5: 8081744-8083604 Arabidopsis thaliana
AT5G23950 1.0kb upstream 1.0kb upstream 1000 false Chr5: 8081744-8082743 Arabidopsis thaliana
AT5G23950 1.0kb downstream 1.0kb downstream 1861 true Chr5: 8082744-8084604 Arabidopsis thaliana
AT5G23950 1.0kb downstream 1.0kb downstream 1000 false Chr5: 8083605-8084604 Arabidopsis thaliana
AT5G23950 2.0kb upstream 2.0kb upstream 2861 true Chr5: 8080744-8083604 Arabidopsis thaliana
AT5G23950 2.0kb upstream 2.0kb upstream 2000 false Chr5: 8080744-8082743 Arabidopsis thaliana
AT5G23950 2.0kb downstream 2.0kb downstream 2861 true Chr5: 8082744-8085604 Arabidopsis thaliana
AT5G23950 2.0kb downstream 2.0kb downstream 2000 false Chr5: 8083605-8085604 Arabidopsis thaliana
AT5G23950 5.0kb upstream 5.0kb upstream 5861 true Chr5: 8077744-8083604 Arabidopsis thaliana
AT5G23950 5.0kb upstream 5.0kb upstream 5000 false Chr5: 8077744-8082743 Arabidopsis thaliana
AT5G23950 5.0kb downstream 5.0kb downstream 5861 true Chr5: 8082744-8088604 Arabidopsis thaliana
AT5G23950 5.0kb downstream 5.0kb downstream 5000 false Chr5: 8083605-8088604 Arabidopsis thaliana
AT5G23950 10.0kb upstream 10.0kb upstream 10861 true Chr5: 8072744-8083604 Arabidopsis thaliana
AT5G23950 10.0kb upstream 10.0kb upstream 10000 false Chr5: 8072744-8082743 Arabidopsis thaliana
AT5G23950 10.0kb downstream 10.0kb downstream 10861 true Chr5: 8082744-8093604 Arabidopsis thaliana
AT5G23950 10.0kb downstream 10.0kb downstream 10000 false Chr5: 8083605-8093604 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376176 5261 Brassicaceae View MSA
123827589 5264 Brassicales-Malvales View MSA
124347463 5266 SBM View MSA
124238134 5268 Malvidae View MSA
124061180 5270 Rosid View MSA
123750922 5271 Pentapetalae View MSA
122794010 5272 Eudicot View MSA
122044841 5273 Angiosperm View MSA
121351739 5274 Embryophyte View MSA
123427392 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.368        
cufflinks 0.667        
cufflinks 0.485        
cufflinks 1.376       High
cufflinks 1.439       High
cufflinks 0.383        

0 Strain