Gene : FRO4 A. thaliana TAIR10
Primary Identifier:  ? AT5G23980 Defline:  (1 of 2) PTHR11972//PTHR11972:SF62 - NADPH OXIDASE // FERRIC REDUCTION OXIDASE 4-RELATED
Genomic Order:  2277 Name:  ? AT5G23980
Secondary Identifier:  ? PAC:19670294
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-5934 Arabidopsis thaliana pathologic  
Athaliana PWY-6854 Arabidopsis thaliana pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G23980 0.5kb upstream 0.5kb upstream 3772 true Chr5: 8098052-8101823 Arabidopsis thaliana
AT5G23980 0.5kb upstream 0.5kb upstream 500 false Chr5: 8101324-8101823 Arabidopsis thaliana
AT5G23980 0.5kb downstream 0.5kb downstream 3772 true Chr5: 8097552-8101323 Arabidopsis thaliana
AT5G23980 0.5kb downstream 0.5kb downstream 500 false Chr5: 8097552-8098051 Arabidopsis thaliana
AT5G23980 1.0kb upstream 1.0kb upstream 4272 true Chr5: 8098052-8102323 Arabidopsis thaliana
AT5G23980 1.0kb upstream 1.0kb upstream 1000 false Chr5: 8101324-8102323 Arabidopsis thaliana
AT5G23980 1.0kb downstream 1.0kb downstream 4272 true Chr5: 8097052-8101323 Arabidopsis thaliana
AT5G23980 1.0kb downstream 1.0kb downstream 1000 false Chr5: 8097052-8098051 Arabidopsis thaliana
AT5G23980 2.0kb upstream 2.0kb upstream 5272 true Chr5: 8098052-8103323 Arabidopsis thaliana
AT5G23980 2.0kb upstream 2.0kb upstream 2000 false Chr5: 8101324-8103323 Arabidopsis thaliana
AT5G23980 2.0kb downstream 2.0kb downstream 5272 true Chr5: 8096052-8101323 Arabidopsis thaliana
AT5G23980 2.0kb downstream 2.0kb downstream 2000 false Chr5: 8096052-8098051 Arabidopsis thaliana
AT5G23980 5.0kb upstream 5.0kb upstream 8272 true Chr5: 8098052-8106323 Arabidopsis thaliana
AT5G23980 5.0kb upstream 5.0kb upstream 5000 false Chr5: 8101324-8106323 Arabidopsis thaliana
AT5G23980 5.0kb downstream 5.0kb downstream 8272 true Chr5: 8093052-8101323 Arabidopsis thaliana
AT5G23980 5.0kb downstream 5.0kb downstream 5000 false Chr5: 8093052-8098051 Arabidopsis thaliana
AT5G23980 10.0kb upstream 10.0kb upstream 13272 true Chr5: 8098052-8111323 Arabidopsis thaliana
AT5G23980 10.0kb upstream 10.0kb upstream 10000 false Chr5: 8101324-8111323 Arabidopsis thaliana
AT5G23980 10.0kb downstream 10.0kb downstream 13272 true Chr5: 8088052-8101323 Arabidopsis thaliana
AT5G23980 10.0kb downstream 10.0kb downstream 10000 false Chr5: 8088052-8098051 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362985 5261 Brassicaceae View MSA
123827837 5264 Brassicales-Malvales View MSA
124321489 5266 SBM View MSA
124252171 5268 Malvidae View MSA
124071281 5270 Rosid View MSA
123746738 5271 Pentapetalae View MSA
122787767 5272 Eudicot View MSA
122051677 5273 Angiosperm View MSA
121345980 5274 Embryophyte View MSA
123428579 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.581        
cufflinks 0.023     Low  
cufflinks 4.724        
cufflinks 0.005     Low Low
cufflinks 6.559       High
cufflinks 0.044     Low  

0 Strain