Gene : DUF8 A. thaliana TAIR10
Primary Identifier:  ? AT5G23770 Defline:  (1 of 7) PTHR31917:SF20 - AGENET DOMAIN-CONTAINING PROTEIN-RELATED
Genomic Order:  2254 Name:  ? AT5G23770
Secondary Identifier:  ? PAC:19672633
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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G23770 0.5kb upstream 0.5kb upstream 3033 true Chr5: 8014381-8017413 Arabidopsis thaliana
AT5G23770 0.5kb upstream 0.5kb upstream 500 false Chr5: 8016914-8017413 Arabidopsis thaliana
AT5G23770 0.5kb downstream 0.5kb downstream 3033 true Chr5: 8013881-8016913 Arabidopsis thaliana
AT5G23770 0.5kb downstream 0.5kb downstream 500 false Chr5: 8013881-8014380 Arabidopsis thaliana
AT5G23770 1.0kb upstream 1.0kb upstream 3533 true Chr5: 8014381-8017913 Arabidopsis thaliana
AT5G23770 1.0kb upstream 1.0kb upstream 1000 false Chr5: 8016914-8017913 Arabidopsis thaliana
AT5G23770 1.0kb downstream 1.0kb downstream 3533 true Chr5: 8013381-8016913 Arabidopsis thaliana
AT5G23770 1.0kb downstream 1.0kb downstream 1000 false Chr5: 8013381-8014380 Arabidopsis thaliana
AT5G23770 2.0kb upstream 2.0kb upstream 4533 true Chr5: 8014381-8018913 Arabidopsis thaliana
AT5G23770 2.0kb upstream 2.0kb upstream 2000 false Chr5: 8016914-8018913 Arabidopsis thaliana
AT5G23770 2.0kb downstream 2.0kb downstream 4533 true Chr5: 8012381-8016913 Arabidopsis thaliana
AT5G23770 2.0kb downstream 2.0kb downstream 2000 false Chr5: 8012381-8014380 Arabidopsis thaliana
AT5G23770 5.0kb upstream 5.0kb upstream 7533 true Chr5: 8014381-8021913 Arabidopsis thaliana
AT5G23770 5.0kb upstream 5.0kb upstream 5000 false Chr5: 8016914-8021913 Arabidopsis thaliana
AT5G23770 5.0kb downstream 5.0kb downstream 7533 true Chr5: 8009381-8016913 Arabidopsis thaliana
AT5G23770 5.0kb downstream 5.0kb downstream 5000 false Chr5: 8009381-8014380 Arabidopsis thaliana
AT5G23770 10.0kb upstream 10.0kb upstream 12533 true Chr5: 8014381-8026913 Arabidopsis thaliana
AT5G23770 10.0kb upstream 10.0kb upstream 10000 false Chr5: 8016914-8026913 Arabidopsis thaliana
AT5G23770 10.0kb downstream 10.0kb downstream 12533 true Chr5: 8004381-8016913 Arabidopsis thaliana
AT5G23770 10.0kb downstream 10.0kb downstream 10000 false Chr5: 8004381-8014380 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121499748 5273 Angiosperm View MSA
122338616 5261 Brassicaceae View MSA
123779171 5264 Brassicales-Malvales View MSA
124277501 5266 SBM View MSA
124132695 5268 Malvidae View MSA
123860969 5270 Rosid View MSA
123446545 5271 Pentapetalae View MSA
122482094 5272 Eudicot View MSA
120773085 5274 Embryophyte View MSA
122815409 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.394        
cufflinks 0.315     Low  
cufflinks 0.756       High
cufflinks 0.319     Low  
cufflinks 0.652        
cufflinks 0.158     Low Low

0 Strain