Gene : AT5G26260 A. thaliana TAIR10
Defline:  (1 of 85) 3.4.19.12 - Ubiquitinyl hydrolase 1 / Ubiquitin thiolesterase Genomic Order:  2514
Name:  ? AT5G26260 Secondary Identifier:  ? PAC:19668216
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G26260 0.5kb upstream 0.5kb upstream 2438 true Chr5: 9199963-9202400 Arabidopsis thaliana
AT5G26260 0.5kb upstream 0.5kb upstream 500 false Chr5: 9199963-9200462 Arabidopsis thaliana
AT5G26260 0.5kb downstream 0.5kb downstream 2438 true Chr5: 9200463-9202900 Arabidopsis thaliana
AT5G26260 0.5kb downstream 0.5kb downstream 500 false Chr5: 9202401-9202900 Arabidopsis thaliana
AT5G26260 1.0kb upstream 1.0kb upstream 2938 true Chr5: 9199463-9202400 Arabidopsis thaliana
AT5G26260 1.0kb upstream 1.0kb upstream 1000 false Chr5: 9199463-9200462 Arabidopsis thaliana
AT5G26260 1.0kb downstream 1.0kb downstream 2938 true Chr5: 9200463-9203400 Arabidopsis thaliana
AT5G26260 1.0kb downstream 1.0kb downstream 1000 false Chr5: 9202401-9203400 Arabidopsis thaliana
AT5G26260 2.0kb upstream 2.0kb upstream 3938 true Chr5: 9198463-9202400 Arabidopsis thaliana
AT5G26260 2.0kb upstream 2.0kb upstream 2000 false Chr5: 9198463-9200462 Arabidopsis thaliana
AT5G26260 2.0kb downstream 2.0kb downstream 3938 true Chr5: 9200463-9204400 Arabidopsis thaliana
AT5G26260 2.0kb downstream 2.0kb downstream 2000 false Chr5: 9202401-9204400 Arabidopsis thaliana
AT5G26260 5.0kb upstream 5.0kb upstream 6938 true Chr5: 9195463-9202400 Arabidopsis thaliana
AT5G26260 5.0kb upstream 5.0kb upstream 5000 false Chr5: 9195463-9200462 Arabidopsis thaliana
AT5G26260 5.0kb downstream 5.0kb downstream 6938 true Chr5: 9200463-9207400 Arabidopsis thaliana
AT5G26260 5.0kb downstream 5.0kb downstream 5000 false Chr5: 9202401-9207400 Arabidopsis thaliana
AT5G26260 10.0kb upstream 10.0kb upstream 11938 true Chr5: 9190463-9202400 Arabidopsis thaliana
AT5G26260 10.0kb upstream 10.0kb upstream 10000 false Chr5: 9190463-9200462 Arabidopsis thaliana
AT5G26260 10.0kb downstream 10.0kb downstream 11938 true Chr5: 9200463-9212400 Arabidopsis thaliana
AT5G26260 10.0kb downstream 10.0kb downstream 10000 false Chr5: 9202401-9212400 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029521 5273 Angiosperm View MSA
122331111 5261 Brassicaceae Singleton cluster - no MSA
123840583 5264 Brassicales-Malvales View MSA
124347661 5266 SBM View MSA
124252315 5268 Malvidae View MSA
124073089 5270 Rosid View MSA
123752970 5271 Pentapetalae View MSA
122797935 5272 Eudicot View MSA
123429159 5275 Viridiplantae View MSA
121349273 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.176     Low Low
cufflinks 52.747     High  
cufflinks 0.303        
cufflinks 101.977     High  
cufflinks 0.269        
cufflinks 140.345     High High

0 Strain