Gene : AT5G26180 A. thaliana TAIR10
Defline:  (1 of 1) K15264 - putative methyltransferase [EC:2.1.1.-] (NSUN5, WBSCR20) Genomic Order:  2506
Name:  ? AT5G26180 Secondary Identifier:  ? PAC:19666164
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G26180 0.5kb upstream 0.5kb upstream 4776 true Chr5: 9148727-9153502 Arabidopsis thaliana
AT5G26180 0.5kb upstream 0.5kb upstream 500 false Chr5: 9148727-9149226 Arabidopsis thaliana
AT5G26180 0.5kb downstream 0.5kb downstream 4776 true Chr5: 9149227-9154002 Arabidopsis thaliana
AT5G26180 0.5kb downstream 0.5kb downstream 500 false Chr5: 9153503-9154002 Arabidopsis thaliana
AT5G26180 1.0kb upstream 1.0kb upstream 5276 true Chr5: 9148227-9153502 Arabidopsis thaliana
AT5G26180 1.0kb upstream 1.0kb upstream 1000 false Chr5: 9148227-9149226 Arabidopsis thaliana
AT5G26180 1.0kb downstream 1.0kb downstream 5276 true Chr5: 9149227-9154502 Arabidopsis thaliana
AT5G26180 1.0kb downstream 1.0kb downstream 1000 false Chr5: 9153503-9154502 Arabidopsis thaliana
AT5G26180 2.0kb upstream 2.0kb upstream 6276 true Chr5: 9147227-9153502 Arabidopsis thaliana
AT5G26180 2.0kb upstream 2.0kb upstream 2000 false Chr5: 9147227-9149226 Arabidopsis thaliana
AT5G26180 2.0kb downstream 2.0kb downstream 6276 true Chr5: 9149227-9155502 Arabidopsis thaliana
AT5G26180 2.0kb downstream 2.0kb downstream 2000 false Chr5: 9153503-9155502 Arabidopsis thaliana
AT5G26180 5.0kb upstream 5.0kb upstream 9276 true Chr5: 9144227-9153502 Arabidopsis thaliana
AT5G26180 5.0kb upstream 5.0kb upstream 5000 false Chr5: 9144227-9149226 Arabidopsis thaliana
AT5G26180 5.0kb downstream 5.0kb downstream 9276 true Chr5: 9149227-9158502 Arabidopsis thaliana
AT5G26180 5.0kb downstream 5.0kb downstream 5000 false Chr5: 9153503-9158502 Arabidopsis thaliana
AT5G26180 10.0kb upstream 10.0kb upstream 14276 true Chr5: 9139227-9153502 Arabidopsis thaliana
AT5G26180 10.0kb upstream 10.0kb upstream 10000 false Chr5: 9139227-9149226 Arabidopsis thaliana
AT5G26180 10.0kb downstream 10.0kb downstream 14276 true Chr5: 9149227-9163502 Arabidopsis thaliana
AT5G26180 10.0kb downstream 10.0kb downstream 10000 false Chr5: 9153503-9163502 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370951 5261 Brassicaceae View MSA
123829613 5264 Brassicales-Malvales View MSA
124341513 5266 SBM View MSA
124243146 5268 Malvidae View MSA
124061219 5270 Rosid View MSA
123738087 5271 Pentapetalae View MSA
122791189 5272 Eudicot View MSA
122043756 5273 Angiosperm View MSA
121346877 5274 Embryophyte View MSA
123427921 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.188        
cufflinks 3.325        
cufflinks 1.675       Low
cufflinks 3.493       High
cufflinks 1.529       Low
cufflinks 3.071        

0 Strain