Gene : NADP-ME3 A. thaliana TAIR10
Primary Identifier:  ? AT5G25880 Defline:  (1 of 2) PTHR23406//PTHR23406:SF31 - MALIC ENZYME-RELATED // NADP-DEPENDENT MALIC ENZYME 2-RELATED
Genomic Order:  2476 Name:  ? AT5G25880
Secondary Identifier:  ? PAC:19669505
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3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana GLUCONEO-PWY Arabidopsis thaliana pathologic  
Athaliana PWY-241 Arabidopsis thaliana pathologic  
Athaliana PWY-7117 Arabidopsis thaliana pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G25880 0.5kb upstream 0.5kb upstream 4329 true Chr5: 9024049-9028377 Arabidopsis thaliana
AT5G25880 0.5kb upstream 0.5kb upstream 500 false Chr5: 9024049-9024548 Arabidopsis thaliana
AT5G25880 0.5kb downstream 0.5kb downstream 4329 true Chr5: 9024549-9028877 Arabidopsis thaliana
AT5G25880 0.5kb downstream 0.5kb downstream 500 false Chr5: 9028378-9028877 Arabidopsis thaliana
AT5G25880 1.0kb upstream 1.0kb upstream 4829 true Chr5: 9023549-9028377 Arabidopsis thaliana
AT5G25880 1.0kb upstream 1.0kb upstream 1000 false Chr5: 9023549-9024548 Arabidopsis thaliana
AT5G25880 1.0kb downstream 1.0kb downstream 4829 true Chr5: 9024549-9029377 Arabidopsis thaliana
AT5G25880 1.0kb downstream 1.0kb downstream 1000 false Chr5: 9028378-9029377 Arabidopsis thaliana
AT5G25880 2.0kb upstream 2.0kb upstream 5829 true Chr5: 9022549-9028377 Arabidopsis thaliana
AT5G25880 2.0kb upstream 2.0kb upstream 2000 false Chr5: 9022549-9024548 Arabidopsis thaliana
AT5G25880 2.0kb downstream 2.0kb downstream 5829 true Chr5: 9024549-9030377 Arabidopsis thaliana
AT5G25880 2.0kb downstream 2.0kb downstream 2000 false Chr5: 9028378-9030377 Arabidopsis thaliana
AT5G25880 5.0kb upstream 5.0kb upstream 8829 true Chr5: 9019549-9028377 Arabidopsis thaliana
AT5G25880 5.0kb upstream 5.0kb upstream 5000 false Chr5: 9019549-9024548 Arabidopsis thaliana
AT5G25880 5.0kb downstream 5.0kb downstream 8829 true Chr5: 9024549-9033377 Arabidopsis thaliana
AT5G25880 5.0kb downstream 5.0kb downstream 5000 false Chr5: 9028378-9033377 Arabidopsis thaliana
AT5G25880 10.0kb upstream 10.0kb upstream 13829 true Chr5: 9014549-9028377 Arabidopsis thaliana
AT5G25880 10.0kb upstream 10.0kb upstream 10000 false Chr5: 9014549-9024548 Arabidopsis thaliana
AT5G25880 10.0kb downstream 10.0kb downstream 13829 true Chr5: 9024549-9038377 Arabidopsis thaliana
AT5G25880 10.0kb downstream 10.0kb downstream 10000 false Chr5: 9028378-9038377 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378939 5261 Brassicaceae View MSA
123837048 5264 Brassicales-Malvales View MSA
124345373 5266 SBM View MSA
124247919 5268 Malvidae View MSA
124068705 5270 Rosid View MSA
123751350 5271 Pentapetalae View MSA
122794130 5272 Eudicot View MSA
122042224 5273 Angiosperm View MSA
121345569 5274 Embryophyte View MSA
123428715 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.576        
cufflinks 0.374        
cufflinks 0.184     Low Low
cufflinks 0.359     Low  
cufflinks 0.447        
cufflinks 0.736       High

0 Strain