Gene : AT5G25800 A. thaliana TAIR10
Defline:  (1 of 1) PTHR12801:SF51 - PROTEIN Y56A3A.33 Genomic Order:  2468
Name:  ? AT5G25800 Secondary Identifier:  ? PAC:19665641
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G25800 0.5kb upstream 0.5kb upstream 3752 true Chr5: 8979622-8983373 Arabidopsis thaliana
AT5G25800 0.5kb upstream 0.5kb upstream 500 false Chr5: 8982874-8983373 Arabidopsis thaliana
AT5G25800 0.5kb downstream 0.5kb downstream 3752 true Chr5: 8979122-8982873 Arabidopsis thaliana
AT5G25800 0.5kb downstream 0.5kb downstream 500 false Chr5: 8979122-8979621 Arabidopsis thaliana
AT5G25800 1.0kb upstream 1.0kb upstream 4252 true Chr5: 8979622-8983873 Arabidopsis thaliana
AT5G25800 1.0kb upstream 1.0kb upstream 1000 false Chr5: 8982874-8983873 Arabidopsis thaliana
AT5G25800 1.0kb downstream 1.0kb downstream 4252 true Chr5: 8978622-8982873 Arabidopsis thaliana
AT5G25800 1.0kb downstream 1.0kb downstream 1000 false Chr5: 8978622-8979621 Arabidopsis thaliana
AT5G25800 2.0kb upstream 2.0kb upstream 5252 true Chr5: 8979622-8984873 Arabidopsis thaliana
AT5G25800 2.0kb upstream 2.0kb upstream 2000 false Chr5: 8982874-8984873 Arabidopsis thaliana
AT5G25800 2.0kb downstream 2.0kb downstream 5252 true Chr5: 8977622-8982873 Arabidopsis thaliana
AT5G25800 2.0kb downstream 2.0kb downstream 2000 false Chr5: 8977622-8979621 Arabidopsis thaliana
AT5G25800 5.0kb upstream 5.0kb upstream 8252 true Chr5: 8979622-8987873 Arabidopsis thaliana
AT5G25800 5.0kb upstream 5.0kb upstream 5000 false Chr5: 8982874-8987873 Arabidopsis thaliana
AT5G25800 5.0kb downstream 5.0kb downstream 8252 true Chr5: 8974622-8982873 Arabidopsis thaliana
AT5G25800 5.0kb downstream 5.0kb downstream 5000 false Chr5: 8974622-8979621 Arabidopsis thaliana
AT5G25800 10.0kb upstream 10.0kb upstream 13252 true Chr5: 8979622-8992873 Arabidopsis thaliana
AT5G25800 10.0kb upstream 10.0kb upstream 10000 false Chr5: 8982874-8992873 Arabidopsis thaliana
AT5G25800 10.0kb downstream 10.0kb downstream 13252 true Chr5: 8969622-8982873 Arabidopsis thaliana
AT5G25800 10.0kb downstream 10.0kb downstream 10000 false Chr5: 8969622-8979621 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360976 5261 Brassicaceae View MSA
123840144 5264 Brassicales-Malvales View MSA
124345141 5266 SBM View MSA
124242254 5268 Malvidae View MSA
124062252 5270 Rosid View MSA
123736446 5271 Pentapetalae View MSA
122787363 5272 Eudicot View MSA
122044600 5273 Angiosperm View MSA
121347070 5274 Embryophyte View MSA
123425683 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.207        
cufflinks 5.313       High
cufflinks 3.246        
cufflinks 5.308       High
cufflinks 2.544       Low
cufflinks 4.539        

0 Strain