Gene : YUC6 A. thaliana TAIR10
Primary Identifier:  ? AT5G25620 Defline:  (1 of 4) PTHR23023//PTHR23023:SF37 - DIMETHYLANILINE MONOOXYGENASE // INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA2-RELATED
Genomic Order:  2457 Name:  ? AT5G25620
Secondary Identifier:  ? PAC:19672110
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWYDQC-4 Arabidopsis thaliana pathologic  

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G25620 0.5kb upstream 0.5kb upstream 4219 true Chr5: 8935040-8939258 Arabidopsis thaliana
AT5G25620 0.5kb upstream 0.5kb upstream 500 false Chr5: 8938759-8939258 Arabidopsis thaliana
AT5G25620 0.5kb downstream 0.5kb downstream 4219 true Chr5: 8934540-8938758 Arabidopsis thaliana
AT5G25620 0.5kb downstream 0.5kb downstream 500 false Chr5: 8934540-8935039 Arabidopsis thaliana
AT5G25620 1.0kb upstream 1.0kb upstream 4719 true Chr5: 8935040-8939758 Arabidopsis thaliana
AT5G25620 1.0kb upstream 1.0kb upstream 1000 false Chr5: 8938759-8939758 Arabidopsis thaliana
AT5G25620 1.0kb downstream 1.0kb downstream 4719 true Chr5: 8934040-8938758 Arabidopsis thaliana
AT5G25620 1.0kb downstream 1.0kb downstream 1000 false Chr5: 8934040-8935039 Arabidopsis thaliana
AT5G25620 2.0kb upstream 2.0kb upstream 5719 true Chr5: 8935040-8940758 Arabidopsis thaliana
AT5G25620 2.0kb upstream 2.0kb upstream 2000 false Chr5: 8938759-8940758 Arabidopsis thaliana
AT5G25620 2.0kb downstream 2.0kb downstream 5719 true Chr5: 8933040-8938758 Arabidopsis thaliana
AT5G25620 2.0kb downstream 2.0kb downstream 2000 false Chr5: 8933040-8935039 Arabidopsis thaliana
AT5G25620 5.0kb upstream 5.0kb upstream 8719 true Chr5: 8935040-8943758 Arabidopsis thaliana
AT5G25620 5.0kb upstream 5.0kb upstream 5000 false Chr5: 8938759-8943758 Arabidopsis thaliana
AT5G25620 5.0kb downstream 5.0kb downstream 8719 true Chr5: 8930040-8938758 Arabidopsis thaliana
AT5G25620 5.0kb downstream 5.0kb downstream 5000 false Chr5: 8930040-8935039 Arabidopsis thaliana
AT5G25620 10.0kb upstream 10.0kb upstream 13719 true Chr5: 8935040-8948758 Arabidopsis thaliana
AT5G25620 10.0kb upstream 10.0kb upstream 10000 false Chr5: 8938759-8948758 Arabidopsis thaliana
AT5G25620 10.0kb downstream 10.0kb downstream 13719 true Chr5: 8925040-8938758 Arabidopsis thaliana
AT5G25620 10.0kb downstream 10.0kb downstream 10000 false Chr5: 8925040-8935039 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371447 5261 Brassicaceae View MSA
123834592 5264 Brassicales-Malvales View MSA
124345724 5266 SBM View MSA
124244331 5268 Malvidae View MSA
124069370 5270 Rosid View MSA
123747095 5271 Pentapetalae View MSA
122790040 5272 Eudicot View MSA
122050610 5273 Angiosperm View MSA
121351632 5274 Embryophyte View MSA
123426700 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.593        
cufflinks 1.309        
cufflinks 0.325       Low
cufflinks 1.809       High
cufflinks 0.301       Low
cufflinks 1.054        

0 Strain