Gene : AT5G25530 A. thaliana TAIR10
Defline:  (1 of 2) PTHR24078:SF266 - DNAJ HEAT SHOCK PROTEIN-RELATED Genomic Order:  2448
Name:  ? AT5G25530 Secondary Identifier:  ? PAC:19666478
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G25530 0.5kb upstream 0.5kb upstream 1790 true Chr5: 8889665-8891454 Arabidopsis thaliana
AT5G25530 0.5kb upstream 0.5kb upstream 500 false Chr5: 8890955-8891454 Arabidopsis thaliana
AT5G25530 0.5kb downstream 0.5kb downstream 1790 true Chr5: 8889165-8890954 Arabidopsis thaliana
AT5G25530 0.5kb downstream 0.5kb downstream 500 false Chr5: 8889165-8889664 Arabidopsis thaliana
AT5G25530 1.0kb upstream 1.0kb upstream 2290 true Chr5: 8889665-8891954 Arabidopsis thaliana
AT5G25530 1.0kb upstream 1.0kb upstream 1000 false Chr5: 8890955-8891954 Arabidopsis thaliana
AT5G25530 1.0kb downstream 1.0kb downstream 2290 true Chr5: 8888665-8890954 Arabidopsis thaliana
AT5G25530 1.0kb downstream 1.0kb downstream 1000 false Chr5: 8888665-8889664 Arabidopsis thaliana
AT5G25530 2.0kb upstream 2.0kb upstream 3290 true Chr5: 8889665-8892954 Arabidopsis thaliana
AT5G25530 2.0kb upstream 2.0kb upstream 2000 false Chr5: 8890955-8892954 Arabidopsis thaliana
AT5G25530 2.0kb downstream 2.0kb downstream 3290 true Chr5: 8887665-8890954 Arabidopsis thaliana
AT5G25530 2.0kb downstream 2.0kb downstream 2000 false Chr5: 8887665-8889664 Arabidopsis thaliana
AT5G25530 5.0kb upstream 5.0kb upstream 6290 true Chr5: 8889665-8895954 Arabidopsis thaliana
AT5G25530 5.0kb upstream 5.0kb upstream 5000 false Chr5: 8890955-8895954 Arabidopsis thaliana
AT5G25530 5.0kb downstream 5.0kb downstream 6290 true Chr5: 8884665-8890954 Arabidopsis thaliana
AT5G25530 5.0kb downstream 5.0kb downstream 5000 false Chr5: 8884665-8889664 Arabidopsis thaliana
AT5G25530 10.0kb upstream 10.0kb upstream 11290 true Chr5: 8889665-8900954 Arabidopsis thaliana
AT5G25530 10.0kb upstream 10.0kb upstream 10000 false Chr5: 8890955-8900954 Arabidopsis thaliana
AT5G25530 10.0kb downstream 10.0kb downstream 11290 true Chr5: 8879665-8890954 Arabidopsis thaliana
AT5G25530 10.0kb downstream 10.0kb downstream 10000 false Chr5: 8879665-8889664 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365907 5261 Brassicaceae View MSA
123835639 5264 Brassicales-Malvales View MSA
124341675 5266 SBM View MSA
124251147 5268 Malvidae View MSA
124061179 5270 Rosid View MSA
123739863 5271 Pentapetalae View MSA
122789363 5272 Eudicot View MSA
122051182 5273 Angiosperm View MSA
123429128 5275 Viridiplantae View MSA
121350390 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.043     Low Low
cufflinks 0.07     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.115     Low High
cufflinks 0.05     Low  
cufflinks 0.073     Low  

0 Strain