Gene : RECQSIM A. thaliana TAIR10
Primary Identifier:  ? AT5G27680 Defline:  (1 of 1) K10900 - werner syndrome ATP-dependent helicase [EC:3.6.4.12] (WRN, RECQL2)
Genomic Order:  2644 Name:  ? AT5G27680
Secondary Identifier:  ? PAC:19665303
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0 Pathways

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G27680 0.5kb upstream 0.5kb upstream 5672 true Chr5: 9793790-9799461 Arabidopsis thaliana
AT5G27680 0.5kb upstream 0.5kb upstream 500 false Chr5: 9798962-9799461 Arabidopsis thaliana
AT5G27680 0.5kb downstream 0.5kb downstream 5672 true Chr5: 9793290-9798961 Arabidopsis thaliana
AT5G27680 0.5kb downstream 0.5kb downstream 500 false Chr5: 9793290-9793789 Arabidopsis thaliana
AT5G27680 1.0kb upstream 1.0kb upstream 6172 true Chr5: 9793790-9799961 Arabidopsis thaliana
AT5G27680 1.0kb upstream 1.0kb upstream 1000 false Chr5: 9798962-9799961 Arabidopsis thaliana
AT5G27680 1.0kb downstream 1.0kb downstream 6172 true Chr5: 9792790-9798961 Arabidopsis thaliana
AT5G27680 1.0kb downstream 1.0kb downstream 1000 false Chr5: 9792790-9793789 Arabidopsis thaliana
AT5G27680 2.0kb upstream 2.0kb upstream 7172 true Chr5: 9793790-9800961 Arabidopsis thaliana
AT5G27680 2.0kb upstream 2.0kb upstream 2000 false Chr5: 9798962-9800961 Arabidopsis thaliana
AT5G27680 2.0kb downstream 2.0kb downstream 7172 true Chr5: 9791790-9798961 Arabidopsis thaliana
AT5G27680 2.0kb downstream 2.0kb downstream 2000 false Chr5: 9791790-9793789 Arabidopsis thaliana
AT5G27680 5.0kb upstream 5.0kb upstream 10172 true Chr5: 9793790-9803961 Arabidopsis thaliana
AT5G27680 5.0kb upstream 5.0kb upstream 5000 false Chr5: 9798962-9803961 Arabidopsis thaliana
AT5G27680 5.0kb downstream 5.0kb downstream 10172 true Chr5: 9788790-9798961 Arabidopsis thaliana
AT5G27680 5.0kb downstream 5.0kb downstream 5000 false Chr5: 9788790-9793789 Arabidopsis thaliana
AT5G27680 10.0kb upstream 10.0kb upstream 15172 true Chr5: 9793790-9808961 Arabidopsis thaliana
AT5G27680 10.0kb upstream 10.0kb upstream 10000 false Chr5: 9798962-9808961 Arabidopsis thaliana
AT5G27680 10.0kb downstream 10.0kb downstream 15172 true Chr5: 9783790-9798961 Arabidopsis thaliana
AT5G27680 10.0kb downstream 10.0kb downstream 10000 false Chr5: 9783790-9793789 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041916 5273 Angiosperm View MSA
122364646 5261 Brassicaceae View MSA
123831398 5264 Brassicales-Malvales View MSA
124342004 5266 SBM View MSA
124240731 5268 Malvidae View MSA
124050369 5270 Rosid View MSA
123739387 5271 Pentapetalae View MSA
122788103 5272 Eudicot View MSA
121350517 5274 Embryophyte View MSA
123427743 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.85        
cufflinks 2.235        
cufflinks 1.096        
cufflinks 2.102        
cufflinks 0.719       Low
cufflinks 2.399       High

0 Strain