Gene : MIRO1 A. thaliana TAIR10
Primary Identifier:  ? AT5G27540 Defline:  (1 of 2) K07870 - Ras homolog gene family, member T1 (RHOT1, ARHT1)
Genomic Order:  2630 Name:  ? AT5G27540
Secondary Identifier:  ? PAC:19666277
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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G27540 0.5kb upstream 0.5kb upstream 5530 true Chr5: 9721925-9727454 Arabidopsis thaliana
AT5G27540 0.5kb upstream 0.5kb upstream 500 false Chr5: 9721925-9722424 Arabidopsis thaliana
AT5G27540 0.5kb downstream 0.5kb downstream 5530 true Chr5: 9722425-9727954 Arabidopsis thaliana
AT5G27540 0.5kb downstream 0.5kb downstream 500 false Chr5: 9727455-9727954 Arabidopsis thaliana
AT5G27540 1.0kb upstream 1.0kb upstream 6030 true Chr5: 9721425-9727454 Arabidopsis thaliana
AT5G27540 1.0kb upstream 1.0kb upstream 1000 false Chr5: 9721425-9722424 Arabidopsis thaliana
AT5G27540 1.0kb downstream 1.0kb downstream 6030 true Chr5: 9722425-9728454 Arabidopsis thaliana
AT5G27540 1.0kb downstream 1.0kb downstream 1000 false Chr5: 9727455-9728454 Arabidopsis thaliana
AT5G27540 2.0kb upstream 2.0kb upstream 7030 true Chr5: 9720425-9727454 Arabidopsis thaliana
AT5G27540 2.0kb upstream 2.0kb upstream 2000 false Chr5: 9720425-9722424 Arabidopsis thaliana
AT5G27540 2.0kb downstream 2.0kb downstream 7030 true Chr5: 9722425-9729454 Arabidopsis thaliana
AT5G27540 2.0kb downstream 2.0kb downstream 2000 false Chr5: 9727455-9729454 Arabidopsis thaliana
AT5G27540 5.0kb upstream 5.0kb upstream 10030 true Chr5: 9717425-9727454 Arabidopsis thaliana
AT5G27540 5.0kb upstream 5.0kb upstream 5000 false Chr5: 9717425-9722424 Arabidopsis thaliana
AT5G27540 5.0kb downstream 5.0kb downstream 10030 true Chr5: 9722425-9732454 Arabidopsis thaliana
AT5G27540 5.0kb downstream 5.0kb downstream 5000 false Chr5: 9727455-9732454 Arabidopsis thaliana
AT5G27540 10.0kb upstream 10.0kb upstream 15030 true Chr5: 9712425-9727454 Arabidopsis thaliana
AT5G27540 10.0kb upstream 10.0kb upstream 10000 false Chr5: 9712425-9722424 Arabidopsis thaliana
AT5G27540 10.0kb downstream 10.0kb downstream 15030 true Chr5: 9722425-9737454 Arabidopsis thaliana
AT5G27540 10.0kb downstream 10.0kb downstream 10000 false Chr5: 9727455-9737454 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374649 5261 Brassicaceae View MSA
123827444 5264 Brassicales-Malvales View MSA
124339042 5266 SBM View MSA
124242999 5268 Malvidae View MSA
124072743 5270 Rosid View MSA
123746250 5271 Pentapetalae View MSA
122793310 5272 Eudicot View MSA
122043927 5273 Angiosperm View MSA
121347375 5274 Embryophyte View MSA
123428304 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.927        
cufflinks 6.989        
cufflinks 4.985       Low
cufflinks 7.247        
cufflinks 5.128       Low
cufflinks 7.601       High

0 Strain