Gene : AT5G35160 A. thaliana TAIR10
Defline:  (1 of 1) PTHR10766//PTHR10766:SF54 - TRANSMEMBRANE 9 SUPERFAMILY PROTEIN // ENDOMEMBRANE FAMILY PROTEIN 70 Genomic Order:  2828
Name:  ? AT5G35160 Secondary Identifier:  ? PAC:19665378
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G35160 0.5kb upstream 0.5kb upstream 3015 true Chr5: 13414251-13417265 Arabidopsis thaliana
AT5G35160 0.5kb upstream 0.5kb upstream 500 false Chr5: 13414251-13414750 Arabidopsis thaliana
AT5G35160 0.5kb downstream 0.5kb downstream 3015 true Chr5: 13414751-13417765 Arabidopsis thaliana
AT5G35160 0.5kb downstream 0.5kb downstream 500 false Chr5: 13417266-13417765 Arabidopsis thaliana
AT5G35160 1.0kb upstream 1.0kb upstream 3515 true Chr5: 13413751-13417265 Arabidopsis thaliana
AT5G35160 1.0kb upstream 1.0kb upstream 1000 false Chr5: 13413751-13414750 Arabidopsis thaliana
AT5G35160 1.0kb downstream 1.0kb downstream 3515 true Chr5: 13414751-13418265 Arabidopsis thaliana
AT5G35160 1.0kb downstream 1.0kb downstream 1000 false Chr5: 13417266-13418265 Arabidopsis thaliana
AT5G35160 2.0kb upstream 2.0kb upstream 4515 true Chr5: 13412751-13417265 Arabidopsis thaliana
AT5G35160 2.0kb upstream 2.0kb upstream 2000 false Chr5: 13412751-13414750 Arabidopsis thaliana
AT5G35160 2.0kb downstream 2.0kb downstream 4515 true Chr5: 13414751-13419265 Arabidopsis thaliana
AT5G35160 2.0kb downstream 2.0kb downstream 2000 false Chr5: 13417266-13419265 Arabidopsis thaliana
AT5G35160 5.0kb upstream 5.0kb upstream 7515 true Chr5: 13409751-13417265 Arabidopsis thaliana
AT5G35160 5.0kb upstream 5.0kb upstream 5000 false Chr5: 13409751-13414750 Arabidopsis thaliana
AT5G35160 5.0kb downstream 5.0kb downstream 7515 true Chr5: 13414751-13422265 Arabidopsis thaliana
AT5G35160 5.0kb downstream 5.0kb downstream 5000 false Chr5: 13417266-13422265 Arabidopsis thaliana
AT5G35160 10.0kb upstream 10.0kb upstream 12515 true Chr5: 13404751-13417265 Arabidopsis thaliana
AT5G35160 10.0kb upstream 10.0kb upstream 10000 false Chr5: 13404751-13414750 Arabidopsis thaliana
AT5G35160 10.0kb downstream 10.0kb downstream 12515 true Chr5: 13414751-13427265 Arabidopsis thaliana
AT5G35160 10.0kb downstream 10.0kb downstream 10000 false Chr5: 13417266-13427265 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367073 5261 Brassicaceae View MSA
123830060 5264 Brassicales-Malvales View MSA
124338777 5266 SBM View MSA
124240989 5268 Malvidae View MSA
124063523 5270 Rosid View MSA
123747213 5271 Pentapetalae View MSA
122787756 5272 Eudicot View MSA
122045331 5273 Angiosperm View MSA
121349188 5274 Embryophyte View MSA
123426870 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.332        
cufflinks 27.625        
cufflinks 13.085        
cufflinks 25.087        
cufflinks 11.296       Low
cufflinks 33.743     High High

0 Strain