Gene : AT5G37980 A. thaliana TAIR10
Defline:  (1 of 2) K07119//K08070 - uncharacterized protein (K07119) // 2-alkenal reductase (E1.3.1.74) Genomic Order:  3092
Name:  ? AT5G37980 Secondary Identifier:  ? PAC:19671663
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G37980 0.5kb upstream 0.5kb upstream 2226 true Chr5: 15130860-15133085 Arabidopsis thaliana
AT5G37980 0.5kb upstream 0.5kb upstream 500 false Chr5: 15130860-15131359 Arabidopsis thaliana
AT5G37980 0.5kb downstream 0.5kb downstream 2226 true Chr5: 15131360-15133585 Arabidopsis thaliana
AT5G37980 0.5kb downstream 0.5kb downstream 500 false Chr5: 15133086-15133585 Arabidopsis thaliana
AT5G37980 1.0kb upstream 1.0kb upstream 2726 true Chr5: 15130360-15133085 Arabidopsis thaliana
AT5G37980 1.0kb upstream 1.0kb upstream 1000 false Chr5: 15130360-15131359 Arabidopsis thaliana
AT5G37980 1.0kb downstream 1.0kb downstream 2726 true Chr5: 15131360-15134085 Arabidopsis thaliana
AT5G37980 1.0kb downstream 1.0kb downstream 1000 false Chr5: 15133086-15134085 Arabidopsis thaliana
AT5G37980 2.0kb upstream 2.0kb upstream 3726 true Chr5: 15129360-15133085 Arabidopsis thaliana
AT5G37980 2.0kb upstream 2.0kb upstream 2000 false Chr5: 15129360-15131359 Arabidopsis thaliana
AT5G37980 2.0kb downstream 2.0kb downstream 3726 true Chr5: 15131360-15135085 Arabidopsis thaliana
AT5G37980 2.0kb downstream 2.0kb downstream 2000 false Chr5: 15133086-15135085 Arabidopsis thaliana
AT5G37980 5.0kb upstream 5.0kb upstream 6726 true Chr5: 15126360-15133085 Arabidopsis thaliana
AT5G37980 5.0kb upstream 5.0kb upstream 5000 false Chr5: 15126360-15131359 Arabidopsis thaliana
AT5G37980 5.0kb downstream 5.0kb downstream 6726 true Chr5: 15131360-15138085 Arabidopsis thaliana
AT5G37980 5.0kb downstream 5.0kb downstream 5000 false Chr5: 15133086-15138085 Arabidopsis thaliana
AT5G37980 10.0kb upstream 10.0kb upstream 11726 true Chr5: 15121360-15133085 Arabidopsis thaliana
AT5G37980 10.0kb upstream 10.0kb upstream 10000 false Chr5: 15121360-15131359 Arabidopsis thaliana
AT5G37980 10.0kb downstream 10.0kb downstream 11726 true Chr5: 15131360-15143085 Arabidopsis thaliana
AT5G37980 10.0kb downstream 10.0kb downstream 10000 false Chr5: 15133086-15143085 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122331763 5261 Brassicaceae View MSA
123772907 5264 Brassicales-Malvales View MSA
124271412 5266 SBM View MSA
124248485 5268 Malvidae View MSA
124067817 5270 Rosid View MSA
123751695 5271 Pentapetalae View MSA
122796065 5272 Eudicot View MSA
122046784 5273 Angiosperm View MSA
121350474 5274 Embryophyte View MSA
123428381 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.216     Low  
cufflinks 2.805        
cufflinks 0.186     Low  
cufflinks 2.792        
cufflinks 0.172     Low  
cufflinks 4.263       High

0 Strain