Gene : AT5G38030 A. thaliana TAIR10
Defline:  (1 of 4) PTHR11206//PTHR11206:SF79 - MULTIDRUG RESISTANCE PROTEIN // MATE EFFLUX FAMILY PROTEIN Genomic Order:  3097
Name:  ? AT5G38030 Secondary Identifier:  ? PAC:19667188
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G38030 0.5kb upstream 0.5kb upstream 4712 true Chr5: 15171246-15175957 Arabidopsis thaliana
AT5G38030 0.5kb upstream 0.5kb upstream 500 false Chr5: 15175458-15175957 Arabidopsis thaliana
AT5G38030 0.5kb downstream 0.5kb downstream 4712 true Chr5: 15170746-15175457 Arabidopsis thaliana
AT5G38030 0.5kb downstream 0.5kb downstream 500 false Chr5: 15170746-15171245 Arabidopsis thaliana
AT5G38030 1.0kb upstream 1.0kb upstream 5212 true Chr5: 15171246-15176457 Arabidopsis thaliana
AT5G38030 1.0kb upstream 1.0kb upstream 1000 false Chr5: 15175458-15176457 Arabidopsis thaliana
AT5G38030 1.0kb downstream 1.0kb downstream 5212 true Chr5: 15170246-15175457 Arabidopsis thaliana
AT5G38030 1.0kb downstream 1.0kb downstream 1000 false Chr5: 15170246-15171245 Arabidopsis thaliana
AT5G38030 2.0kb upstream 2.0kb upstream 6212 true Chr5: 15171246-15177457 Arabidopsis thaliana
AT5G38030 2.0kb upstream 2.0kb upstream 2000 false Chr5: 15175458-15177457 Arabidopsis thaliana
AT5G38030 2.0kb downstream 2.0kb downstream 6212 true Chr5: 15169246-15175457 Arabidopsis thaliana
AT5G38030 2.0kb downstream 2.0kb downstream 2000 false Chr5: 15169246-15171245 Arabidopsis thaliana
AT5G38030 5.0kb upstream 5.0kb upstream 9212 true Chr5: 15171246-15180457 Arabidopsis thaliana
AT5G38030 5.0kb upstream 5.0kb upstream 5000 false Chr5: 15175458-15180457 Arabidopsis thaliana
AT5G38030 5.0kb downstream 5.0kb downstream 9212 true Chr5: 15166246-15175457 Arabidopsis thaliana
AT5G38030 5.0kb downstream 5.0kb downstream 5000 false Chr5: 15166246-15171245 Arabidopsis thaliana
AT5G38030 10.0kb upstream 10.0kb upstream 14212 true Chr5: 15171246-15185457 Arabidopsis thaliana
AT5G38030 10.0kb upstream 10.0kb upstream 10000 false Chr5: 15175458-15185457 Arabidopsis thaliana
AT5G38030 10.0kb downstream 10.0kb downstream 14212 true Chr5: 15161246-15175457 Arabidopsis thaliana
AT5G38030 10.0kb downstream 10.0kb downstream 10000 false Chr5: 15161246-15171245 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122331971 5261 Brassicaceae View MSA
123773092 5264 Brassicales-Malvales View MSA
124271593 5266 SBM View MSA
124244328 5268 Malvidae View MSA
124068110 5270 Rosid View MSA
123753109 5271 Pentapetalae View MSA
122797339 5272 Eudicot View MSA
122050809 5273 Angiosperm View MSA
121344541 5274 Embryophyte View MSA
123428088 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.072     Low  
cufflinks 13.945        
cufflinks 0.031     Low Low
cufflinks 13.263        
cufflinks 0.122     Low  
cufflinks 18.109        

0 Strain