Gene : AT5G37740 A. thaliana TAIR10
Defline:  (1 of 3) PTHR23180:SF268 - CALCIUM-DEPENDENT LIPID-BINDING DOMAIN-CONTAINING PROTEIN Genomic Order:  3069
Name:  ? AT5G37740 Secondary Identifier:  ? PAC:19670698
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G37740 0.5kb upstream 0.5kb upstream 2167 true Chr5: 14991505-14993671 Arabidopsis thaliana
AT5G37740 0.5kb upstream 0.5kb upstream 500 false Chr5: 14991505-14992004 Arabidopsis thaliana
AT5G37740 0.5kb downstream 0.5kb downstream 2167 true Chr5: 14992005-14994171 Arabidopsis thaliana
AT5G37740 0.5kb downstream 0.5kb downstream 500 false Chr5: 14993672-14994171 Arabidopsis thaliana
AT5G37740 1.0kb upstream 1.0kb upstream 2667 true Chr5: 14991005-14993671 Arabidopsis thaliana
AT5G37740 1.0kb upstream 1.0kb upstream 1000 false Chr5: 14991005-14992004 Arabidopsis thaliana
AT5G37740 1.0kb downstream 1.0kb downstream 2667 true Chr5: 14992005-14994671 Arabidopsis thaliana
AT5G37740 1.0kb downstream 1.0kb downstream 1000 false Chr5: 14993672-14994671 Arabidopsis thaliana
AT5G37740 2.0kb upstream 2.0kb upstream 3667 true Chr5: 14990005-14993671 Arabidopsis thaliana
AT5G37740 2.0kb upstream 2.0kb upstream 2000 false Chr5: 14990005-14992004 Arabidopsis thaliana
AT5G37740 2.0kb downstream 2.0kb downstream 3667 true Chr5: 14992005-14995671 Arabidopsis thaliana
AT5G37740 2.0kb downstream 2.0kb downstream 2000 false Chr5: 14993672-14995671 Arabidopsis thaliana
AT5G37740 5.0kb upstream 5.0kb upstream 6667 true Chr5: 14987005-14993671 Arabidopsis thaliana
AT5G37740 5.0kb upstream 5.0kb upstream 5000 false Chr5: 14987005-14992004 Arabidopsis thaliana
AT5G37740 5.0kb downstream 5.0kb downstream 6667 true Chr5: 14992005-14998671 Arabidopsis thaliana
AT5G37740 5.0kb downstream 5.0kb downstream 5000 false Chr5: 14993672-14998671 Arabidopsis thaliana
AT5G37740 10.0kb upstream 10.0kb upstream 11667 true Chr5: 14982005-14993671 Arabidopsis thaliana
AT5G37740 10.0kb upstream 10.0kb upstream 10000 false Chr5: 14982005-14992004 Arabidopsis thaliana
AT5G37740 10.0kb downstream 10.0kb downstream 11667 true Chr5: 14992005-15003671 Arabidopsis thaliana
AT5G37740 10.0kb downstream 10.0kb downstream 10000 false Chr5: 14993672-15003671 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378985 5261 Brassicaceae View MSA
123839305 5264 Brassicales-Malvales View MSA
124349558 5266 SBM View MSA
124253597 5268 Malvidae View MSA
124069795 5270 Rosid View MSA
123747243 5271 Pentapetalae View MSA
122796022 5272 Eudicot View MSA
122048793 5273 Angiosperm View MSA
121311115 5274 Embryophyte View MSA
123348457 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.394        
cufflinks 16.096        
cufflinks 4.913       Low
cufflinks 35.953     High High
cufflinks 8.889        
cufflinks 10.768        

0 Strain