Gene : AT5G37730 A. thaliana TAIR10
Defline:  (1 of 3) PTHR33270:SF5 - GB Genomic Order:  3068
Name:  ? AT5G37730 Secondary Identifier:  ? PAC:19666151
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G37730 0.5kb upstream 0.5kb upstream 1385 true Chr5: 14986033-14987417 Arabidopsis thaliana
AT5G37730 0.5kb upstream 0.5kb upstream 500 false Chr5: 14986918-14987417 Arabidopsis thaliana
AT5G37730 0.5kb downstream 0.5kb downstream 1385 true Chr5: 14985533-14986917 Arabidopsis thaliana
AT5G37730 0.5kb downstream 0.5kb downstream 500 false Chr5: 14985533-14986032 Arabidopsis thaliana
AT5G37730 1.0kb upstream 1.0kb upstream 1885 true Chr5: 14986033-14987917 Arabidopsis thaliana
AT5G37730 1.0kb upstream 1.0kb upstream 1000 false Chr5: 14986918-14987917 Arabidopsis thaliana
AT5G37730 1.0kb downstream 1.0kb downstream 1885 true Chr5: 14985033-14986917 Arabidopsis thaliana
AT5G37730 1.0kb downstream 1.0kb downstream 1000 false Chr5: 14985033-14986032 Arabidopsis thaliana
AT5G37730 2.0kb upstream 2.0kb upstream 2885 true Chr5: 14986033-14988917 Arabidopsis thaliana
AT5G37730 2.0kb upstream 2.0kb upstream 2000 false Chr5: 14986918-14988917 Arabidopsis thaliana
AT5G37730 2.0kb downstream 2.0kb downstream 2885 true Chr5: 14984033-14986917 Arabidopsis thaliana
AT5G37730 2.0kb downstream 2.0kb downstream 2000 false Chr5: 14984033-14986032 Arabidopsis thaliana
AT5G37730 5.0kb upstream 5.0kb upstream 5885 true Chr5: 14986033-14991917 Arabidopsis thaliana
AT5G37730 5.0kb upstream 5.0kb upstream 5000 false Chr5: 14986918-14991917 Arabidopsis thaliana
AT5G37730 5.0kb downstream 5.0kb downstream 5885 true Chr5: 14981033-14986917 Arabidopsis thaliana
AT5G37730 5.0kb downstream 5.0kb downstream 5000 false Chr5: 14981033-14986032 Arabidopsis thaliana
AT5G37730 10.0kb upstream 10.0kb upstream 10885 true Chr5: 14986033-14996917 Arabidopsis thaliana
AT5G37730 10.0kb upstream 10.0kb upstream 10000 false Chr5: 14986918-14996917 Arabidopsis thaliana
AT5G37730 10.0kb downstream 10.0kb downstream 10885 true Chr5: 14976033-14986917 Arabidopsis thaliana
AT5G37730 10.0kb downstream 10.0kb downstream 10000 false Chr5: 14976033-14986032 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122330938 5261 Brassicaceae Singleton cluster - no MSA
123772154 5264 Brassicales-Malvales Singleton cluster - no MSA
124270675 5266 SBM Singleton cluster - no MSA
124126734 5268 Malvidae Singleton cluster - no MSA
124041045 5270 Rosid View MSA
123749588 5271 Pentapetalae View MSA
122797585 5272 Eudicot View MSA
122049795 5273 Angiosperm View MSA
121311591 5274 Embryophyte View MSA
123348867 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.015     Low  
cufflinks 0.017     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.341     Low High
cufflinks 0.018     Low  
cufflinks 0.038     Low  

0 Strain