Gene : AT5G40510 A. thaliana TAIR10
Defline:  (1 of 2) PTHR31902:SF5 - SUCRASE/FERREDOXIN-LIKE PROTEIN Genomic Order:  3360
Name:  ? AT5G40510 Secondary Identifier:  ? PAC:19672718
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G40510 0.5kb upstream 0.5kb upstream 2411 true Chr5: 16228688-16231098 Arabidopsis thaliana
AT5G40510 0.5kb upstream 0.5kb upstream 500 false Chr5: 16228688-16229187 Arabidopsis thaliana
AT5G40510 0.5kb downstream 0.5kb downstream 2411 true Chr5: 16229188-16231598 Arabidopsis thaliana
AT5G40510 0.5kb downstream 0.5kb downstream 500 false Chr5: 16231099-16231598 Arabidopsis thaliana
AT5G40510 1.0kb upstream 1.0kb upstream 2911 true Chr5: 16228188-16231098 Arabidopsis thaliana
AT5G40510 1.0kb upstream 1.0kb upstream 1000 false Chr5: 16228188-16229187 Arabidopsis thaliana
AT5G40510 1.0kb downstream 1.0kb downstream 2911 true Chr5: 16229188-16232098 Arabidopsis thaliana
AT5G40510 1.0kb downstream 1.0kb downstream 1000 false Chr5: 16231099-16232098 Arabidopsis thaliana
AT5G40510 2.0kb upstream 2.0kb upstream 3911 true Chr5: 16227188-16231098 Arabidopsis thaliana
AT5G40510 2.0kb upstream 2.0kb upstream 2000 false Chr5: 16227188-16229187 Arabidopsis thaliana
AT5G40510 2.0kb downstream 2.0kb downstream 3911 true Chr5: 16229188-16233098 Arabidopsis thaliana
AT5G40510 2.0kb downstream 2.0kb downstream 2000 false Chr5: 16231099-16233098 Arabidopsis thaliana
AT5G40510 5.0kb upstream 5.0kb upstream 6911 true Chr5: 16224188-16231098 Arabidopsis thaliana
AT5G40510 5.0kb upstream 5.0kb upstream 5000 false Chr5: 16224188-16229187 Arabidopsis thaliana
AT5G40510 5.0kb downstream 5.0kb downstream 6911 true Chr5: 16229188-16236098 Arabidopsis thaliana
AT5G40510 5.0kb downstream 5.0kb downstream 5000 false Chr5: 16231099-16236098 Arabidopsis thaliana
AT5G40510 10.0kb upstream 10.0kb upstream 11911 true Chr5: 16219188-16231098 Arabidopsis thaliana
AT5G40510 10.0kb upstream 10.0kb upstream 10000 false Chr5: 16219188-16229187 Arabidopsis thaliana
AT5G40510 10.0kb downstream 10.0kb downstream 11911 true Chr5: 16229188-16241098 Arabidopsis thaliana
AT5G40510 10.0kb downstream 10.0kb downstream 10000 false Chr5: 16231099-16241098 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375008 5261 Brassicaceae View MSA
123838680 5264 Brassicales-Malvales View MSA
124338185 5266 SBM View MSA
124251406 5268 Malvidae View MSA
124060412 5270 Rosid View MSA
123745989 5271 Pentapetalae View MSA
122792561 5272 Eudicot View MSA
122051641 5273 Angiosperm View MSA
121346149 5274 Embryophyte View MSA
123427661 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.159     Low  
cufflinks 6.306        
cufflinks 0.066     Low Low
cufflinks 9.885       High
cufflinks 0.144     Low  
cufflinks 6.911        

0 Strain