Gene : AT5G40370 A. thaliana TAIR10
Defline:  (1 of 1) PTHR10168//PTHR10168:SF104 - GLUTAREDOXIN // SUBFAMILY NOT NAMED Genomic Order:  3344
Name:  ? AT5G40370 Secondary Identifier:  ? PAC:19670378
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana THIOREDOX-PWY Arabidopsis thaliana pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G40370 0.5kb upstream 0.5kb upstream 2105 true Chr5: 16147594-16149698 Arabidopsis thaliana
AT5G40370 0.5kb upstream 0.5kb upstream 500 false Chr5: 16149199-16149698 Arabidopsis thaliana
AT5G40370 0.5kb downstream 0.5kb downstream 2105 true Chr5: 16147094-16149198 Arabidopsis thaliana
AT5G40370 0.5kb downstream 0.5kb downstream 500 false Chr5: 16147094-16147593 Arabidopsis thaliana
AT5G40370 1.0kb upstream 1.0kb upstream 2605 true Chr5: 16147594-16150198 Arabidopsis thaliana
AT5G40370 1.0kb upstream 1.0kb upstream 1000 false Chr5: 16149199-16150198 Arabidopsis thaliana
AT5G40370 1.0kb downstream 1.0kb downstream 2605 true Chr5: 16146594-16149198 Arabidopsis thaliana
AT5G40370 1.0kb downstream 1.0kb downstream 1000 false Chr5: 16146594-16147593 Arabidopsis thaliana
AT5G40370 2.0kb upstream 2.0kb upstream 3605 true Chr5: 16147594-16151198 Arabidopsis thaliana
AT5G40370 2.0kb upstream 2.0kb upstream 2000 false Chr5: 16149199-16151198 Arabidopsis thaliana
AT5G40370 2.0kb downstream 2.0kb downstream 3605 true Chr5: 16145594-16149198 Arabidopsis thaliana
AT5G40370 2.0kb downstream 2.0kb downstream 2000 false Chr5: 16145594-16147593 Arabidopsis thaliana
AT5G40370 5.0kb upstream 5.0kb upstream 6605 true Chr5: 16147594-16154198 Arabidopsis thaliana
AT5G40370 5.0kb upstream 5.0kb upstream 5000 false Chr5: 16149199-16154198 Arabidopsis thaliana
AT5G40370 5.0kb downstream 5.0kb downstream 6605 true Chr5: 16142594-16149198 Arabidopsis thaliana
AT5G40370 5.0kb downstream 5.0kb downstream 5000 false Chr5: 16142594-16147593 Arabidopsis thaliana
AT5G40370 10.0kb upstream 10.0kb upstream 11605 true Chr5: 16147594-16159198 Arabidopsis thaliana
AT5G40370 10.0kb upstream 10.0kb upstream 10000 false Chr5: 16149199-16159198 Arabidopsis thaliana
AT5G40370 10.0kb downstream 10.0kb downstream 11605 true Chr5: 16137594-16149198 Arabidopsis thaliana
AT5G40370 10.0kb downstream 10.0kb downstream 10000 false Chr5: 16137594-16147593 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122331292 5261 Brassicaceae Singleton cluster - no MSA
123772488 5264 Brassicales-Malvales Singleton cluster - no MSA
124271001 5266 SBM Singleton cluster - no MSA
124248160 5268 Malvidae View MSA
124065401 5270 Rosid View MSA
123746542 5271 Pentapetalae View MSA
122795168 5272 Eudicot View MSA
122042909 5273 Angiosperm View MSA
121349337 5274 Embryophyte View MSA
123428660 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 49.557     High  
cufflinks 37.2     High  
cufflinks 48.539     High  
cufflinks 26.516        
cufflinks 49.544     High  
cufflinks 20.031       Low

0 Strain