Gene : AT5G40320 A. thaliana TAIR10
Defline:  (1 of 126) PTHR32410//PTHR32410:SF152 - FAMILY NOT NAMED // C1 DOMAIN-CONTAINING PROTEIN-RELATED Genomic Order:  3339
Name:  ? AT5G40320 Secondary Identifier:  ? PAC:19667991
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G40320 0.5kb upstream 0.5kb upstream 2285 true Chr5: 16121257-16123541 Arabidopsis thaliana
AT5G40320 0.5kb upstream 0.5kb upstream 500 false Chr5: 16121257-16121756 Arabidopsis thaliana
AT5G40320 0.5kb downstream 0.5kb downstream 2285 true Chr5: 16121757-16124041 Arabidopsis thaliana
AT5G40320 0.5kb downstream 0.5kb downstream 500 false Chr5: 16123542-16124041 Arabidopsis thaliana
AT5G40320 1.0kb upstream 1.0kb upstream 2785 true Chr5: 16120757-16123541 Arabidopsis thaliana
AT5G40320 1.0kb upstream 1.0kb upstream 1000 false Chr5: 16120757-16121756 Arabidopsis thaliana
AT5G40320 1.0kb downstream 1.0kb downstream 2785 true Chr5: 16121757-16124541 Arabidopsis thaliana
AT5G40320 1.0kb downstream 1.0kb downstream 1000 false Chr5: 16123542-16124541 Arabidopsis thaliana
AT5G40320 2.0kb upstream 2.0kb upstream 3785 true Chr5: 16119757-16123541 Arabidopsis thaliana
AT5G40320 2.0kb upstream 2.0kb upstream 2000 false Chr5: 16119757-16121756 Arabidopsis thaliana
AT5G40320 2.0kb downstream 2.0kb downstream 3785 true Chr5: 16121757-16125541 Arabidopsis thaliana
AT5G40320 2.0kb downstream 2.0kb downstream 2000 false Chr5: 16123542-16125541 Arabidopsis thaliana
AT5G40320 5.0kb upstream 5.0kb upstream 6785 true Chr5: 16116757-16123541 Arabidopsis thaliana
AT5G40320 5.0kb upstream 5.0kb upstream 5000 false Chr5: 16116757-16121756 Arabidopsis thaliana
AT5G40320 5.0kb downstream 5.0kb downstream 6785 true Chr5: 16121757-16128541 Arabidopsis thaliana
AT5G40320 5.0kb downstream 5.0kb downstream 5000 false Chr5: 16123542-16128541 Arabidopsis thaliana
AT5G40320 10.0kb upstream 10.0kb upstream 11785 true Chr5: 16111757-16123541 Arabidopsis thaliana
AT5G40320 10.0kb upstream 10.0kb upstream 10000 false Chr5: 16111757-16121756 Arabidopsis thaliana
AT5G40320 10.0kb downstream 10.0kb downstream 11785 true Chr5: 16121757-16133541 Arabidopsis thaliana
AT5G40320 10.0kb downstream 10.0kb downstream 10000 false Chr5: 16123542-16133541 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365921 5261 Brassicaceae View MSA
123799065 5264 Brassicales-Malvales View MSA
124296623 5266 SBM View MSA
124254358 5268 Malvidae View MSA
124070692 5270 Rosid View MSA
123751823 5271 Pentapetalae View MSA
122797568 5272 Eudicot View MSA
122051127 5273 Angiosperm View MSA
121351229 5274 Embryophyte View MSA
123382066 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.382       Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.496        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.499        

0 Strain