Gene : CML37 A. thaliana TAIR10
Primary Identifier:  ? AT5G42380 Defline:  (1 of 2) PTHR10891:SF622 - CALCIUM-BINDING PROTEIN CML37-RELATED
Genomic Order:  3566 Name:  ? AT5G42380
Secondary Identifier:  ? PAC:19672848
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G42380 0.5kb upstream 0.5kb upstream 1291 true Chr5: 16942576-16943866 Arabidopsis thaliana
AT5G42380 0.5kb upstream 0.5kb upstream 500 false Chr5: 16943367-16943866 Arabidopsis thaliana
AT5G42380 0.5kb downstream 0.5kb downstream 1291 true Chr5: 16942076-16943366 Arabidopsis thaliana
AT5G42380 0.5kb downstream 0.5kb downstream 500 false Chr5: 16942076-16942575 Arabidopsis thaliana
AT5G42380 1.0kb upstream 1.0kb upstream 1791 true Chr5: 16942576-16944366 Arabidopsis thaliana
AT5G42380 1.0kb upstream 1.0kb upstream 1000 false Chr5: 16943367-16944366 Arabidopsis thaliana
AT5G42380 1.0kb downstream 1.0kb downstream 1791 true Chr5: 16941576-16943366 Arabidopsis thaliana
AT5G42380 1.0kb downstream 1.0kb downstream 1000 false Chr5: 16941576-16942575 Arabidopsis thaliana
AT5G42380 2.0kb upstream 2.0kb upstream 2791 true Chr5: 16942576-16945366 Arabidopsis thaliana
AT5G42380 2.0kb upstream 2.0kb upstream 2000 false Chr5: 16943367-16945366 Arabidopsis thaliana
AT5G42380 2.0kb downstream 2.0kb downstream 2791 true Chr5: 16940576-16943366 Arabidopsis thaliana
AT5G42380 2.0kb downstream 2.0kb downstream 2000 false Chr5: 16940576-16942575 Arabidopsis thaliana
AT5G42380 5.0kb upstream 5.0kb upstream 5791 true Chr5: 16942576-16948366 Arabidopsis thaliana
AT5G42380 5.0kb upstream 5.0kb upstream 5000 false Chr5: 16943367-16948366 Arabidopsis thaliana
AT5G42380 5.0kb downstream 5.0kb downstream 5791 true Chr5: 16937576-16943366 Arabidopsis thaliana
AT5G42380 5.0kb downstream 5.0kb downstream 5000 false Chr5: 16937576-16942575 Arabidopsis thaliana
AT5G42380 10.0kb upstream 10.0kb upstream 10791 true Chr5: 16942576-16953366 Arabidopsis thaliana
AT5G42380 10.0kb upstream 10.0kb upstream 10000 false Chr5: 16943367-16953366 Arabidopsis thaliana
AT5G42380 10.0kb downstream 10.0kb downstream 10791 true Chr5: 16932576-16943366 Arabidopsis thaliana
AT5G42380 10.0kb downstream 10.0kb downstream 10000 false Chr5: 16932576-16942575 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363229 5261 Brassicaceae View MSA
123798504 5264 Brassicales-Malvales View MSA
124338466 5266 SBM View MSA
124237336 5268 Malvidae View MSA
124071613 5270 Rosid View MSA
123747964 5271 Pentapetalae View MSA
122795822 5272 Eudicot View MSA
122046502 5273 Angiosperm View MSA
121351910 5274 Embryophyte View MSA
123382405 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 30.831     High  
cufflinks 352.537     High High
cufflinks 10.928        
cufflinks 203.802     High  
cufflinks 4.032       Low
cufflinks 221.376     High  

0 Strain