Gene : BIP2 A. thaliana TAIR10
Primary Identifier:  ? AT5G42020 Defline:  (1 of 3) K09490 - heat shock 70kDa protein 5 (HSPA5, BIP)
Genomic Order:  3523 Name:  ? AT5G42020
Secondary Identifier:  ? PAC:19668965
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G42020 0.5kb upstream 0.5kb upstream 3664 true Chr5: 16807483-16811146 Arabidopsis thaliana
AT5G42020 0.5kb upstream 0.5kb upstream 500 false Chr5: 16810647-16811146 Arabidopsis thaliana
AT5G42020 0.5kb downstream 0.5kb downstream 3664 true Chr5: 16806983-16810646 Arabidopsis thaliana
AT5G42020 0.5kb downstream 0.5kb downstream 500 false Chr5: 16806983-16807482 Arabidopsis thaliana
AT5G42020 1.0kb upstream 1.0kb upstream 4164 true Chr5: 16807483-16811646 Arabidopsis thaliana
AT5G42020 1.0kb upstream 1.0kb upstream 1000 false Chr5: 16810647-16811646 Arabidopsis thaliana
AT5G42020 1.0kb downstream 1.0kb downstream 4164 true Chr5: 16806483-16810646 Arabidopsis thaliana
AT5G42020 1.0kb downstream 1.0kb downstream 1000 false Chr5: 16806483-16807482 Arabidopsis thaliana
AT5G42020 2.0kb upstream 2.0kb upstream 5164 true Chr5: 16807483-16812646 Arabidopsis thaliana
AT5G42020 2.0kb upstream 2.0kb upstream 2000 false Chr5: 16810647-16812646 Arabidopsis thaliana
AT5G42020 2.0kb downstream 2.0kb downstream 5164 true Chr5: 16805483-16810646 Arabidopsis thaliana
AT5G42020 2.0kb downstream 2.0kb downstream 2000 false Chr5: 16805483-16807482 Arabidopsis thaliana
AT5G42020 5.0kb upstream 5.0kb upstream 8164 true Chr5: 16807483-16815646 Arabidopsis thaliana
AT5G42020 5.0kb upstream 5.0kb upstream 5000 false Chr5: 16810647-16815646 Arabidopsis thaliana
AT5G42020 5.0kb downstream 5.0kb downstream 8164 true Chr5: 16802483-16810646 Arabidopsis thaliana
AT5G42020 5.0kb downstream 5.0kb downstream 5000 false Chr5: 16802483-16807482 Arabidopsis thaliana
AT5G42020 10.0kb upstream 10.0kb upstream 13164 true Chr5: 16807483-16820646 Arabidopsis thaliana
AT5G42020 10.0kb upstream 10.0kb upstream 10000 false Chr5: 16810647-16820646 Arabidopsis thaliana
AT5G42020 10.0kb downstream 10.0kb downstream 13164 true Chr5: 16797483-16810646 Arabidopsis thaliana
AT5G42020 10.0kb downstream 10.0kb downstream 10000 false Chr5: 16797483-16807482 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378579 5261 Brassicaceae View MSA
123838029 5264 Brassicales-Malvales View MSA
124347689 5266 SBM View MSA
124245601 5268 Malvidae View MSA
124071160 5270 Rosid View MSA
123753199 5271 Pentapetalae View MSA
122797693 5272 Eudicot View MSA
122051630 5273 Angiosperm View MSA
121350405 5274 Embryophyte View MSA
123428541 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 81.555     High High
cufflinks 33.673     High  
cufflinks 25.283       Low
cufflinks 45.107     High  
cufflinks 28.901     High  
cufflinks 58.646     High  

0 Strain