Gene : AT5G41100 A. thaliana TAIR10
Genomic Order:  3424 Name:  ? AT5G41100
Secondary Identifier:  ? PAC:19667645
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G41100 0.5kb upstream 0.5kb upstream 4160 true Chr5: 16446722-16450881 Arabidopsis thaliana
AT5G41100 0.5kb upstream 0.5kb upstream 500 false Chr5: 16446722-16447221 Arabidopsis thaliana
AT5G41100 0.5kb downstream 0.5kb downstream 4160 true Chr5: 16447222-16451381 Arabidopsis thaliana
AT5G41100 0.5kb downstream 0.5kb downstream 500 false Chr5: 16450882-16451381 Arabidopsis thaliana
AT5G41100 1.0kb upstream 1.0kb upstream 4660 true Chr5: 16446222-16450881 Arabidopsis thaliana
AT5G41100 1.0kb upstream 1.0kb upstream 1000 false Chr5: 16446222-16447221 Arabidopsis thaliana
AT5G41100 1.0kb downstream 1.0kb downstream 4660 true Chr5: 16447222-16451881 Arabidopsis thaliana
AT5G41100 1.0kb downstream 1.0kb downstream 1000 false Chr5: 16450882-16451881 Arabidopsis thaliana
AT5G41100 2.0kb upstream 2.0kb upstream 5660 true Chr5: 16445222-16450881 Arabidopsis thaliana
AT5G41100 2.0kb upstream 2.0kb upstream 2000 false Chr5: 16445222-16447221 Arabidopsis thaliana
AT5G41100 2.0kb downstream 2.0kb downstream 5660 true Chr5: 16447222-16452881 Arabidopsis thaliana
AT5G41100 2.0kb downstream 2.0kb downstream 2000 false Chr5: 16450882-16452881 Arabidopsis thaliana
AT5G41100 5.0kb upstream 5.0kb upstream 8660 true Chr5: 16442222-16450881 Arabidopsis thaliana
AT5G41100 5.0kb upstream 5.0kb upstream 5000 false Chr5: 16442222-16447221 Arabidopsis thaliana
AT5G41100 5.0kb downstream 5.0kb downstream 8660 true Chr5: 16447222-16455881 Arabidopsis thaliana
AT5G41100 5.0kb downstream 5.0kb downstream 5000 false Chr5: 16450882-16455881 Arabidopsis thaliana
AT5G41100 10.0kb upstream 10.0kb upstream 13660 true Chr5: 16437222-16450881 Arabidopsis thaliana
AT5G41100 10.0kb upstream 10.0kb upstream 10000 false Chr5: 16437222-16447221 Arabidopsis thaliana
AT5G41100 10.0kb downstream 10.0kb downstream 13660 true Chr5: 16447222-16460881 Arabidopsis thaliana
AT5G41100 10.0kb downstream 10.0kb downstream 10000 false Chr5: 16450882-16460881 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372922 5261 Brassicaceae View MSA
123800459 5264 Brassicales-Malvales View MSA
124297872 5266 SBM View MSA
124149655 5268 Malvidae View MSA
123875417 5270 Rosid View MSA
123745722 5271 Pentapetalae View MSA
122786878 5272 Eudicot View MSA
122041909 5273 Angiosperm View MSA
121348701 5274 Embryophyte View MSA
123380980 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.416        
cufflinks 4.584       High
cufflinks 2.835        
cufflinks 3.879        
cufflinks 2.434       Low
cufflinks 4.226        

0 Strain