Gene : AT5G44040 A. thaliana TAIR10
Genomic Order:  3759 Name:  ? AT5G44040
Secondary Identifier:  ? PAC:19669411
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G44040 0.5kb upstream 0.5kb upstream 2422 true Chr5: 17719659-17722080 Arabidopsis thaliana
AT5G44040 0.5kb upstream 0.5kb upstream 500 false Chr5: 17721581-17722080 Arabidopsis thaliana
AT5G44040 0.5kb downstream 0.5kb downstream 2422 true Chr5: 17719159-17721580 Arabidopsis thaliana
AT5G44040 0.5kb downstream 0.5kb downstream 500 false Chr5: 17719159-17719658 Arabidopsis thaliana
AT5G44040 1.0kb upstream 1.0kb upstream 2922 true Chr5: 17719659-17722580 Arabidopsis thaliana
AT5G44040 1.0kb upstream 1.0kb upstream 1000 false Chr5: 17721581-17722580 Arabidopsis thaliana
AT5G44040 1.0kb downstream 1.0kb downstream 2922 true Chr5: 17718659-17721580 Arabidopsis thaliana
AT5G44040 1.0kb downstream 1.0kb downstream 1000 false Chr5: 17718659-17719658 Arabidopsis thaliana
AT5G44040 2.0kb upstream 2.0kb upstream 3922 true Chr5: 17719659-17723580 Arabidopsis thaliana
AT5G44040 2.0kb upstream 2.0kb upstream 2000 false Chr5: 17721581-17723580 Arabidopsis thaliana
AT5G44040 2.0kb downstream 2.0kb downstream 3922 true Chr5: 17717659-17721580 Arabidopsis thaliana
AT5G44040 2.0kb downstream 2.0kb downstream 2000 false Chr5: 17717659-17719658 Arabidopsis thaliana
AT5G44040 5.0kb upstream 5.0kb upstream 6922 true Chr5: 17719659-17726580 Arabidopsis thaliana
AT5G44040 5.0kb upstream 5.0kb upstream 5000 false Chr5: 17721581-17726580 Arabidopsis thaliana
AT5G44040 5.0kb downstream 5.0kb downstream 6922 true Chr5: 17714659-17721580 Arabidopsis thaliana
AT5G44040 5.0kb downstream 5.0kb downstream 5000 false Chr5: 17714659-17719658 Arabidopsis thaliana
AT5G44040 10.0kb upstream 10.0kb upstream 11922 true Chr5: 17719659-17731580 Arabidopsis thaliana
AT5G44040 10.0kb upstream 10.0kb upstream 10000 false Chr5: 17721581-17731580 Arabidopsis thaliana
AT5G44040 10.0kb downstream 10.0kb downstream 11922 true Chr5: 17709659-17721580 Arabidopsis thaliana
AT5G44040 10.0kb downstream 10.0kb downstream 10000 false Chr5: 17709659-17719658 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363621 5261 Brassicaceae View MSA
123798582 5264 Brassicales-Malvales View MSA
124296198 5266 SBM View MSA
124148419 5268 Malvidae View MSA
124072121 5270 Rosid View MSA
123753133 5271 Pentapetalae View MSA
122794292 5272 Eudicot View MSA
122045555 5273 Angiosperm View MSA
121349890 5274 Embryophyte View MSA
123381485 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.428        
cufflinks 17.12        
cufflinks 4.316        
cufflinks 12.777        
cufflinks 2.666       Low
cufflinks 28.309       High

0 Strain