Gene : ARD4 A. thaliana TAIR10
Primary Identifier:  ? AT5G43850 Defline:  (1 of 1) PTHR23418//PTHR23418:SF4 - ACIREDUCTONE DIOXYGENASE // 1,2-DIHYDROXY-3-KETO-5-METHYLTHIOPENTENE DIOXYGENASE 4
Genomic Order:  3738 Name:  ? AT5G43850
Secondary Identifier:  ? PAC:19667730
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Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-4361 Arabidopsis thaliana pathologic  
Athaliana PWY-7270 Arabidopsis thaliana pathologic  
Athaliana PWY-7528 Arabidopsis thaliana pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G43850 0.5kb upstream 0.5kb upstream 2478 true Chr5: 17627182-17629659 Arabidopsis thaliana
AT5G43850 0.5kb upstream 0.5kb upstream 500 false Chr5: 17629160-17629659 Arabidopsis thaliana
AT5G43850 0.5kb downstream 0.5kb downstream 2478 true Chr5: 17626682-17629159 Arabidopsis thaliana
AT5G43850 0.5kb downstream 0.5kb downstream 500 false Chr5: 17626682-17627181 Arabidopsis thaliana
AT5G43850 1.0kb upstream 1.0kb upstream 2978 true Chr5: 17627182-17630159 Arabidopsis thaliana
AT5G43850 1.0kb upstream 1.0kb upstream 1000 false Chr5: 17629160-17630159 Arabidopsis thaliana
AT5G43850 1.0kb downstream 1.0kb downstream 2978 true Chr5: 17626182-17629159 Arabidopsis thaliana
AT5G43850 1.0kb downstream 1.0kb downstream 1000 false Chr5: 17626182-17627181 Arabidopsis thaliana
AT5G43850 2.0kb upstream 2.0kb upstream 3978 true Chr5: 17627182-17631159 Arabidopsis thaliana
AT5G43850 2.0kb upstream 2.0kb upstream 2000 false Chr5: 17629160-17631159 Arabidopsis thaliana
AT5G43850 2.0kb downstream 2.0kb downstream 3978 true Chr5: 17625182-17629159 Arabidopsis thaliana
AT5G43850 2.0kb downstream 2.0kb downstream 2000 false Chr5: 17625182-17627181 Arabidopsis thaliana
AT5G43850 5.0kb upstream 5.0kb upstream 6978 true Chr5: 17627182-17634159 Arabidopsis thaliana
AT5G43850 5.0kb upstream 5.0kb upstream 5000 false Chr5: 17629160-17634159 Arabidopsis thaliana
AT5G43850 5.0kb downstream 5.0kb downstream 6978 true Chr5: 17622182-17629159 Arabidopsis thaliana
AT5G43850 5.0kb downstream 5.0kb downstream 5000 false Chr5: 17622182-17627181 Arabidopsis thaliana
AT5G43850 10.0kb upstream 10.0kb upstream 11978 true Chr5: 17627182-17639159 Arabidopsis thaliana
AT5G43850 10.0kb upstream 10.0kb upstream 10000 false Chr5: 17629160-17639159 Arabidopsis thaliana
AT5G43850 10.0kb downstream 10.0kb downstream 11978 true Chr5: 17617182-17629159 Arabidopsis thaliana
AT5G43850 10.0kb downstream 10.0kb downstream 10000 false Chr5: 17617182-17627181 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370454 5261 Brassicaceae View MSA
123834672 5264 Brassicales-Malvales View MSA
124342820 5266 SBM View MSA
124240096 5268 Malvidae View MSA
124070684 5270 Rosid View MSA
123741202 5271 Pentapetalae View MSA
122793339 5272 Eudicot View MSA
122046510 5273 Angiosperm View MSA
121343851 5274 Embryophyte View MSA
123424670 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.893        
cufflinks 17.866        
cufflinks 27.032     High  
cufflinks 18.718        
cufflinks 32.955     High High
cufflinks 15.677       Low

0 Strain