Gene : AT5G43830 A. thaliana TAIR10
Defline:  (1 of 2) PTHR11772:SF8 - ALUMINIUM INDUCED PROTEIN WITH YGL AND LRDR MOTIFS-RELATED Genomic Order:  3736
Name:  ? AT5G43830 Secondary Identifier:  ? PAC:19668184
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G43830 0.5kb upstream 0.5kb upstream 2494 true Chr5: 17622336-17624829 Arabidopsis thaliana
AT5G43830 0.5kb upstream 0.5kb upstream 500 false Chr5: 17624330-17624829 Arabidopsis thaliana
AT5G43830 0.5kb downstream 0.5kb downstream 2494 true Chr5: 17621836-17624329 Arabidopsis thaliana
AT5G43830 0.5kb downstream 0.5kb downstream 500 false Chr5: 17621836-17622335 Arabidopsis thaliana
AT5G43830 1.0kb upstream 1.0kb upstream 2994 true Chr5: 17622336-17625329 Arabidopsis thaliana
AT5G43830 1.0kb upstream 1.0kb upstream 1000 false Chr5: 17624330-17625329 Arabidopsis thaliana
AT5G43830 1.0kb downstream 1.0kb downstream 2994 true Chr5: 17621336-17624329 Arabidopsis thaliana
AT5G43830 1.0kb downstream 1.0kb downstream 1000 false Chr5: 17621336-17622335 Arabidopsis thaliana
AT5G43830 2.0kb upstream 2.0kb upstream 3994 true Chr5: 17622336-17626329 Arabidopsis thaliana
AT5G43830 2.0kb upstream 2.0kb upstream 2000 false Chr5: 17624330-17626329 Arabidopsis thaliana
AT5G43830 2.0kb downstream 2.0kb downstream 3994 true Chr5: 17620336-17624329 Arabidopsis thaliana
AT5G43830 2.0kb downstream 2.0kb downstream 2000 false Chr5: 17620336-17622335 Arabidopsis thaliana
AT5G43830 5.0kb upstream 5.0kb upstream 6994 true Chr5: 17622336-17629329 Arabidopsis thaliana
AT5G43830 5.0kb upstream 5.0kb upstream 5000 false Chr5: 17624330-17629329 Arabidopsis thaliana
AT5G43830 5.0kb downstream 5.0kb downstream 6994 true Chr5: 17617336-17624329 Arabidopsis thaliana
AT5G43830 5.0kb downstream 5.0kb downstream 5000 false Chr5: 17617336-17622335 Arabidopsis thaliana
AT5G43830 10.0kb upstream 10.0kb upstream 11994 true Chr5: 17622336-17634329 Arabidopsis thaliana
AT5G43830 10.0kb upstream 10.0kb upstream 10000 false Chr5: 17624330-17634329 Arabidopsis thaliana
AT5G43830 10.0kb downstream 10.0kb downstream 11994 true Chr5: 17612336-17624329 Arabidopsis thaliana
AT5G43830 10.0kb downstream 10.0kb downstream 10000 false Chr5: 17612336-17622335 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370887 5261 Brassicaceae View MSA
123835140 5264 Brassicales-Malvales View MSA
124337817 5266 SBM View MSA
124238518 5268 Malvidae View MSA
124062275 5270 Rosid View MSA
123741924 5271 Pentapetalae View MSA
122789894 5272 Eudicot View MSA
122046778 5273 Angiosperm View MSA
121351327 5274 Embryophyte View MSA
123428842 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 85.517     High High
cufflinks 70.154     High  
cufflinks 78.08     High  
cufflinks 75.441     High  
cufflinks 78.243     High  
cufflinks 68.24     High Low

0 Strain