Gene : PHT1;6 A. thaliana TAIR10
Primary Identifier:  ? AT5G43340 Defline:  (1 of 3) PTHR24064//PTHR24064:SF279 - FAMILY NOT NAMED // MAJOR FACILITATOR PROTEIN-RELATED
Genomic Order:  3680 Name:  ? AT5G43340
Secondary Identifier:  ? PAC:19668150
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G43340 0.5kb upstream 0.5kb upstream 2051 true Chr5: 17393598-17395648 Arabidopsis thaliana
AT5G43340 0.5kb upstream 0.5kb upstream 500 false Chr5: 17395149-17395648 Arabidopsis thaliana
AT5G43340 0.5kb downstream 0.5kb downstream 2051 true Chr5: 17393098-17395148 Arabidopsis thaliana
AT5G43340 0.5kb downstream 0.5kb downstream 500 false Chr5: 17393098-17393597 Arabidopsis thaliana
AT5G43340 1.0kb upstream 1.0kb upstream 2551 true Chr5: 17393598-17396148 Arabidopsis thaliana
AT5G43340 1.0kb upstream 1.0kb upstream 1000 false Chr5: 17395149-17396148 Arabidopsis thaliana
AT5G43340 1.0kb downstream 1.0kb downstream 2551 true Chr5: 17392598-17395148 Arabidopsis thaliana
AT5G43340 1.0kb downstream 1.0kb downstream 1000 false Chr5: 17392598-17393597 Arabidopsis thaliana
AT5G43340 2.0kb upstream 2.0kb upstream 3551 true Chr5: 17393598-17397148 Arabidopsis thaliana
AT5G43340 2.0kb upstream 2.0kb upstream 2000 false Chr5: 17395149-17397148 Arabidopsis thaliana
AT5G43340 2.0kb downstream 2.0kb downstream 3551 true Chr5: 17391598-17395148 Arabidopsis thaliana
AT5G43340 2.0kb downstream 2.0kb downstream 2000 false Chr5: 17391598-17393597 Arabidopsis thaliana
AT5G43340 5.0kb upstream 5.0kb upstream 6551 true Chr5: 17393598-17400148 Arabidopsis thaliana
AT5G43340 5.0kb upstream 5.0kb upstream 5000 false Chr5: 17395149-17400148 Arabidopsis thaliana
AT5G43340 5.0kb downstream 5.0kb downstream 6551 true Chr5: 17388598-17395148 Arabidopsis thaliana
AT5G43340 5.0kb downstream 5.0kb downstream 5000 false Chr5: 17388598-17393597 Arabidopsis thaliana
AT5G43340 10.0kb upstream 10.0kb upstream 11551 true Chr5: 17393598-17405148 Arabidopsis thaliana
AT5G43340 10.0kb upstream 10.0kb upstream 10000 false Chr5: 17395149-17405148 Arabidopsis thaliana
AT5G43340 10.0kb downstream 10.0kb downstream 11551 true Chr5: 17383598-17395148 Arabidopsis thaliana
AT5G43340 10.0kb downstream 10.0kb downstream 10000 false Chr5: 17383598-17393597 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375969 5261 Brassicaceae View MSA
123842924 5264 Brassicales-Malvales View MSA
124323869 5266 SBM View MSA
124253137 5268 Malvidae View MSA
124069579 5270 Rosid View MSA
123750757 5271 Pentapetalae View MSA
122797214 5272 Eudicot View MSA
122045312 5273 Angiosperm View MSA
121348560 5274 Embryophyte View MSA
123428081 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.09     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.028     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain