Gene : TAF4 A. thaliana TAIR10
Primary Identifier:  ? AT5G43130 Defline:  (1 of 2) K03129 - transcription initiation factor TFIID subunit 4 (TAF4)
Genomic Order:  3655 Name:  ? AT5G43130
Secondary Identifier:  ? PAC:19666189
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G43130 0.5kb upstream 0.5kb upstream 6237 true Chr5: 17315449-17321685 Arabidopsis thaliana
AT5G43130 0.5kb upstream 0.5kb upstream 500 false Chr5: 17321186-17321685 Arabidopsis thaliana
AT5G43130 0.5kb downstream 0.5kb downstream 6237 true Chr5: 17314949-17321185 Arabidopsis thaliana
AT5G43130 0.5kb downstream 0.5kb downstream 500 false Chr5: 17314949-17315448 Arabidopsis thaliana
AT5G43130 1.0kb upstream 1.0kb upstream 6737 true Chr5: 17315449-17322185 Arabidopsis thaliana
AT5G43130 1.0kb upstream 1.0kb upstream 1000 false Chr5: 17321186-17322185 Arabidopsis thaliana
AT5G43130 1.0kb downstream 1.0kb downstream 6737 true Chr5: 17314449-17321185 Arabidopsis thaliana
AT5G43130 1.0kb downstream 1.0kb downstream 1000 false Chr5: 17314449-17315448 Arabidopsis thaliana
AT5G43130 2.0kb upstream 2.0kb upstream 7737 true Chr5: 17315449-17323185 Arabidopsis thaliana
AT5G43130 2.0kb upstream 2.0kb upstream 2000 false Chr5: 17321186-17323185 Arabidopsis thaliana
AT5G43130 2.0kb downstream 2.0kb downstream 7737 true Chr5: 17313449-17321185 Arabidopsis thaliana
AT5G43130 2.0kb downstream 2.0kb downstream 2000 false Chr5: 17313449-17315448 Arabidopsis thaliana
AT5G43130 5.0kb upstream 5.0kb upstream 10737 true Chr5: 17315449-17326185 Arabidopsis thaliana
AT5G43130 5.0kb upstream 5.0kb upstream 5000 false Chr5: 17321186-17326185 Arabidopsis thaliana
AT5G43130 5.0kb downstream 5.0kb downstream 10737 true Chr5: 17310449-17321185 Arabidopsis thaliana
AT5G43130 5.0kb downstream 5.0kb downstream 5000 false Chr5: 17310449-17315448 Arabidopsis thaliana
AT5G43130 10.0kb upstream 10.0kb upstream 15737 true Chr5: 17315449-17331185 Arabidopsis thaliana
AT5G43130 10.0kb upstream 10.0kb upstream 10000 false Chr5: 17321186-17331185 Arabidopsis thaliana
AT5G43130 10.0kb downstream 10.0kb downstream 15737 true Chr5: 17305449-17321185 Arabidopsis thaliana
AT5G43130 10.0kb downstream 10.0kb downstream 10000 false Chr5: 17305449-17315448 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365013 5261 Brassicaceae View MSA
123838999 5264 Brassicales-Malvales View MSA
124340787 5266 SBM View MSA
124250919 5268 Malvidae View MSA
124062302 5270 Rosid View MSA
123738111 5271 Pentapetalae View MSA
122789940 5272 Eudicot View MSA
122043785 5273 Angiosperm View MSA
121346006 5274 Embryophyte View MSA
123428499 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.764        
cufflinks 4.572        
cufflinks 3.288       Low
cufflinks 5.233       High
cufflinks 3.839        
cufflinks 4.789        

0 Strain