Protein Family : TBP-associated factor 4 124250919

Method ID:  5268 Method Name:  Malvidae
Sequence Alignment:  View MSA Member Count:  28

28 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
30170.t000170 (1 of 2) K03129 - transcription initiation factor TFIID subunit 4 (TAF4) R. communis v0.1 5516   30170: 877015-882530
orange1.1g048675m.g (1 of 1) PTHR15138:SF14 - IP01149P-RELATED C. sinensis v1.1 6016   scaffold00004: 3370781-3376796
AT5G43130 (1 of 2) K03129 - transcription initiation factor TFIID subunit 4 (TAF4) A. thaliana TAIR10 TAF4 5737   Chr5: 17315449-17321185
Thhalv10003149m.g (1 of 1) KOG2341 - TATA box binding protein (TBP)-associated factor, RNA polymerase II E. salsugineum v1.0 5539   scaffold_17: 2521799-2527337
Ciclev10000177m.g (1 of 1) PTHR15138:SF14 - IP01149P-RELATED C. clementina v1.0 6506   scaffold_5: 34507108-34513613
Lus10018701.g (1 of 5) PTHR15138:SF14 - IP01149P-RELATED L. usitatissimum v1.0 5704   scaffold461: 285213-290916
Lus10033265.g (1 of 5) PTHR15138:SF14 - IP01149P-RELATED L. usitatissimum v1.0 4859   scaffold488: 293571-298429
Lus10008297.g (1 of 5) PTHR15138:SF14 - IP01149P-RELATED L. usitatissimum v1.0 5096   scaffold489: 200666-205761
Lus10007763.g (1 of 5) PTHR15138:SF14 - IP01149P-RELATED L. usitatissimum v1.0 5668   scaffold993: 289064-294731
Gorai.002G132700 (1 of 2) PTHR15138:SF14 - IP01149P-RELATED G. raimondii v2.1 5277   Chr02: 20815218-20820494
Gorai.009G277000 (1 of 2) PTHR15138:SF14 - IP01149P-RELATED G. raimondii v2.1 5604   Chr09: 23240556-23246159
Thecc1EG005271 (1 of 2) K03129 - transcription initiation factor TFIID subunit 4 (TAF4) T. cacao v1.1 6915   scaffold_1: 35852103-35859017
Thecc1EG034730 (1 of 2) K03129 - transcription initiation factor TFIID subunit 4 (TAF4) T. cacao v1.1 6732   scaffold_8: 4548896-4555627
Araha.26289s0003 (1 of 2) PTHR15138:SF14 - IP01149P-RELATED A. halleri v1.1 5773   Scaffold26289: 11562-17334
Cagra.2969s0004 (1 of 2) PTHR15138:SF14 - IP01149P-RELATED C. grandiflora v1.1 5628   Scaffold2969: 10752-16379
Brara.F03820 (1 of 3) PTHR15138:SF14 - IP01149P-RELATED B. rapa FPsc v1.3 4758   A06: 28768586-28773343
Brara.B02456 (1 of 3) PTHR15138:SF14 - IP01149P-RELATED B. rapa FPsc v1.3 4440   A02: 16355736-16360175
Bostr.3148s0164 (1 of 3) PTHR15138:SF14 - IP01149P-RELATED B. stricta v1.2 6142   Scaffold3148: 1264908-1271049
SapurV1A.2033s0020 (1 of 2) K03129 - transcription initiation factor TFIID subunit 4 (TAF4) S. purpurea v1.0 7341   chr14: 894170-901510
SapurV1A.0845s0040 (1 of 2) K03129 - transcription initiation factor TFIID subunit 4 (TAF4) S. purpurea v1.0 6730   chr02: 9725382-9732111
Manes.03G054700 (1 of 2) PTHR15138:SF14 - IP01149P-RELATED M. esculenta v6.1 6323   Chromosome03: 4939835-4946157
Manes.16G088600 (1 of 2) PTHR15138:SF14 - IP01149P-RELATED M. esculenta v6.1 5740   Chromosome16: 24558236-24563975
AL8G17530 (1 of 2) K03129 - transcription initiation factor TFIID subunit 4 (TAF4) A. lyrata v2.1 5952   scaffold_8: 4795708-4801659
Potri.002G119900 (1 of 2) PTHR15138:SF14 - IP01149P-RELATED P. trichocarpa v3.1 8217   Chr02: 8998588-9006804
Potri.014G018000 (1 of 1) K03129 - transcription initiation factor TFIID subunit 4 (TAF4) P. trichocarpa v3.1 7020   Chr14: 1709643-1716662
Podel.14G017800 (1 of 1) K03129 - transcription initiation factor TFIID subunit 4 (TAF4) P. deltoides WV94 v2.1 6707   Chr14: 1318622-1325328
Podel.02G131200 (1 of 3) PTHR15138:SF14 - IP01149P-RELATED P. deltoides WV94 v2.1 7418   Chr02: 9894939-9902356
Carub.0008s0559 (1 of 2) K03129 - transcription initiation factor TFIID subunit 4 (TAF4) C. rubella v1.1 5541   scaffold_8: 2475489-2481029

28 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
30170.m013758 R. communis v0.1 124250919 TBP-associated factor 4 1 5268 Malvidae
AT5G43130.2 A. thaliana TAIR10 124250919 TBP-associated factor 4 1 5268 Malvidae
Thhalv10003149m E. salsugineum v1.0 124250919 TBP-associated factor 4 1 5268 Malvidae
Lus10007763 L. usitatissimum v1.0 124250919 TBP-associated factor 4 4 5268 Malvidae
Lus10018701 L. usitatissimum v1.0 124250919 TBP-associated factor 4 4 5268 Malvidae
Thecc1EG005271t1 T. cacao v1.1 124250919 TBP-associated factor 4 2 5268 Malvidae
orange1.1g048675m C. sinensis v1.1 124250919 TBP-associated factor 4 1 5268 Malvidae
Ciclev10000177m C. clementina v1.0 124250919 TBP-associated factor 4 1 5268 Malvidae
Lus10008297 L. usitatissimum v1.0 124250919 TBP-associated factor 4 4 5268 Malvidae
Lus10033265 L. usitatissimum v1.0 124250919 TBP-associated factor 4 4 5268 Malvidae
Gorai.002G132700.1 G. raimondii v2.1 124250919 TBP-associated factor 4 2 5268 Malvidae
Gorai.009G277000.1 G. raimondii v2.1 124250919 TBP-associated factor 4 2 5268 Malvidae
Thecc1EG034730t1 T. cacao v1.1 124250919 TBP-associated factor 4 2 5268 Malvidae
Araha.26289s0003.1.p A. halleri v1.1 124250919 TBP-associated factor 4 1 5268 Malvidae
Cagra.2969s0004.1.p C. grandiflora v1.1 124250919 TBP-associated factor 4 1 5268 Malvidae
Brara.F03820.1.p B. rapa FPsc v1.3 124250919 TBP-associated factor 4 2 5268 Malvidae
Brara.B02456.1.p B. rapa FPsc v1.3 124250919 TBP-associated factor 4 2 5268 Malvidae
Bostr.3148s0164.1.p B. stricta v1.2 124250919 TBP-associated factor 4 1 5268 Malvidae
SapurV1A.0845s0040.1.p S. purpurea v1.0 124250919 TBP-associated factor 4 2 5268 Malvidae
SapurV1A.2033s0020.1.p S. purpurea v1.0 124250919 TBP-associated factor 4 2 5268 Malvidae
Manes.03G054700.1.p M. esculenta v6.1 124250919 TBP-associated factor 4 2 5268 Malvidae
Manes.16G088600.1.p M. esculenta v6.1 124250919 TBP-associated factor 4 2 5268 Malvidae
AL8G17530.t1 A. lyrata v2.1 124250919 TBP-associated factor 4 1 5268 Malvidae
Potri.014G018000.1.p P. trichocarpa v3.1 124250919 TBP-associated factor 4 2 5268 Malvidae
Potri.002G119900.1.p P. trichocarpa v3.1 124250919 TBP-associated factor 4 2 5268 Malvidae
Podel.14G017800.1.p P. deltoides WV94 v2.1 124250919 TBP-associated factor 4 2 5268 Malvidae
Podel.02G131200.1.p P. deltoides WV94 v2.1 124250919 TBP-associated factor 4 2 5268 Malvidae
Carub.0008s0559.1.p C. rubella v1.1 124250919 TBP-associated factor 4 1 5268 Malvidae