Gene : Thecc1EG005271 T. cacao v1.1
Defline:  (1 of 2) K03129 - transcription initiation factor TFIID subunit 4 (TAF4) Genomic Order:  3508
Name:  ? Thecc1EG005271 Secondary Identifier:  ? PAC:27435761
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG005271 0.5kb upstream 0.5kb upstream 7415 true scaffold_1: 35851603-35859017 Theobroma cacao
Thecc1EG005271 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 35851603-35852102 Theobroma cacao
Thecc1EG005271 0.5kb downstream 0.5kb downstream 7415 true scaffold_1: 35852103-35859517 Theobroma cacao
Thecc1EG005271 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 35859018-35859517 Theobroma cacao
Thecc1EG005271 1.0kb upstream 1.0kb upstream 7915 true scaffold_1: 35851103-35859017 Theobroma cacao
Thecc1EG005271 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 35851103-35852102 Theobroma cacao
Thecc1EG005271 1.0kb downstream 1.0kb downstream 7915 true scaffold_1: 35852103-35860017 Theobroma cacao
Thecc1EG005271 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 35859018-35860017 Theobroma cacao
Thecc1EG005271 2.0kb upstream 2.0kb upstream 8915 true scaffold_1: 35850103-35859017 Theobroma cacao
Thecc1EG005271 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 35850103-35852102 Theobroma cacao
Thecc1EG005271 2.0kb downstream 2.0kb downstream 8915 true scaffold_1: 35852103-35861017 Theobroma cacao
Thecc1EG005271 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 35859018-35861017 Theobroma cacao
Thecc1EG005271 5.0kb upstream 5.0kb upstream 11915 true scaffold_1: 35847103-35859017 Theobroma cacao
Thecc1EG005271 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 35847103-35852102 Theobroma cacao
Thecc1EG005271 5.0kb downstream 5.0kb downstream 11915 true scaffold_1: 35852103-35864017 Theobroma cacao
Thecc1EG005271 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 35859018-35864017 Theobroma cacao
Thecc1EG005271 10.0kb upstream 10.0kb upstream 16915 true scaffold_1: 35842103-35859017 Theobroma cacao
Thecc1EG005271 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 35842103-35852102 Theobroma cacao
Thecc1EG005271 10.0kb downstream 10.0kb downstream 16915 true scaffold_1: 35852103-35869017 Theobroma cacao
Thecc1EG005271 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 35859018-35869017 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123838999 5264 Brassicales-Malvales View MSA
124340787 5266 SBM View MSA
124250919 5268 Malvidae View MSA
124062302 5270 Rosid View MSA
123738111 5271 Pentapetalae View MSA
122789940 5272 Eudicot View MSA
122043785 5273 Angiosperm View MSA
121346006 5274 Embryophyte View MSA
123428499 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain