Gene : AT5G42710 A. thaliana TAIR10
Genomic Order:  3604 Name:  ? AT5G42710
Secondary Identifier:  ? PAC:19667205
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G42710 0.5kb upstream 0.5kb upstream 3770 true Chr5: 17125078-17128847 Arabidopsis thaliana
AT5G42710 0.5kb upstream 0.5kb upstream 500 false Chr5: 17125078-17125577 Arabidopsis thaliana
AT5G42710 0.5kb downstream 0.5kb downstream 3770 true Chr5: 17125578-17129347 Arabidopsis thaliana
AT5G42710 0.5kb downstream 0.5kb downstream 500 false Chr5: 17128848-17129347 Arabidopsis thaliana
AT5G42710 1.0kb upstream 1.0kb upstream 4270 true Chr5: 17124578-17128847 Arabidopsis thaliana
AT5G42710 1.0kb upstream 1.0kb upstream 1000 false Chr5: 17124578-17125577 Arabidopsis thaliana
AT5G42710 1.0kb downstream 1.0kb downstream 4270 true Chr5: 17125578-17129847 Arabidopsis thaliana
AT5G42710 1.0kb downstream 1.0kb downstream 1000 false Chr5: 17128848-17129847 Arabidopsis thaliana
AT5G42710 2.0kb upstream 2.0kb upstream 5270 true Chr5: 17123578-17128847 Arabidopsis thaliana
AT5G42710 2.0kb upstream 2.0kb upstream 2000 false Chr5: 17123578-17125577 Arabidopsis thaliana
AT5G42710 2.0kb downstream 2.0kb downstream 5270 true Chr5: 17125578-17130847 Arabidopsis thaliana
AT5G42710 2.0kb downstream 2.0kb downstream 2000 false Chr5: 17128848-17130847 Arabidopsis thaliana
AT5G42710 5.0kb upstream 5.0kb upstream 8270 true Chr5: 17120578-17128847 Arabidopsis thaliana
AT5G42710 5.0kb upstream 5.0kb upstream 5000 false Chr5: 17120578-17125577 Arabidopsis thaliana
AT5G42710 5.0kb downstream 5.0kb downstream 8270 true Chr5: 17125578-17133847 Arabidopsis thaliana
AT5G42710 5.0kb downstream 5.0kb downstream 5000 false Chr5: 17128848-17133847 Arabidopsis thaliana
AT5G42710 10.0kb upstream 10.0kb upstream 13270 true Chr5: 17115578-17128847 Arabidopsis thaliana
AT5G42710 10.0kb upstream 10.0kb upstream 10000 false Chr5: 17115578-17125577 Arabidopsis thaliana
AT5G42710 10.0kb downstream 10.0kb downstream 13270 true Chr5: 17125578-17138847 Arabidopsis thaliana
AT5G42710 10.0kb downstream 10.0kb downstream 10000 false Chr5: 17128848-17138847 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362991 5261 Brassicaceae View MSA
123838401 5264 Brassicales-Malvales View MSA
124348713 5266 SBM View MSA
124244366 5268 Malvidae View MSA
124070292 5270 Rosid View MSA
123749823 5271 Pentapetalae View MSA
122794423 5272 Eudicot View MSA
122048518 5273 Angiosperm View MSA
121311000 5274 Embryophyte View MSA
123348358 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.123     Low  
cufflinks 0.486        
cufflinks 0.097     Low  
cufflinks 0.751        
cufflinks 0.072     Low Low
cufflinks 0.999       High

0 Strain