Gene : AT5G45470 A. thaliana TAIR10
Defline:  (1 of 1) KOG4788 - Members of chemokine-like factor super family and related proteins Genomic Order:  3922
Name:  ? AT5G45470 Secondary Identifier:  ? PAC:19668922
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G45470 0.5kb upstream 0.5kb upstream 3558 true Chr5: 18421985-18425542 Arabidopsis thaliana
AT5G45470 0.5kb upstream 0.5kb upstream 500 false Chr5: 18425043-18425542 Arabidopsis thaliana
AT5G45470 0.5kb downstream 0.5kb downstream 3558 true Chr5: 18421485-18425042 Arabidopsis thaliana
AT5G45470 0.5kb downstream 0.5kb downstream 500 false Chr5: 18421485-18421984 Arabidopsis thaliana
AT5G45470 1.0kb upstream 1.0kb upstream 4058 true Chr5: 18421985-18426042 Arabidopsis thaliana
AT5G45470 1.0kb upstream 1.0kb upstream 1000 false Chr5: 18425043-18426042 Arabidopsis thaliana
AT5G45470 1.0kb downstream 1.0kb downstream 4058 true Chr5: 18420985-18425042 Arabidopsis thaliana
AT5G45470 1.0kb downstream 1.0kb downstream 1000 false Chr5: 18420985-18421984 Arabidopsis thaliana
AT5G45470 2.0kb upstream 2.0kb upstream 5058 true Chr5: 18421985-18427042 Arabidopsis thaliana
AT5G45470 2.0kb upstream 2.0kb upstream 2000 false Chr5: 18425043-18427042 Arabidopsis thaliana
AT5G45470 2.0kb downstream 2.0kb downstream 5058 true Chr5: 18419985-18425042 Arabidopsis thaliana
AT5G45470 2.0kb downstream 2.0kb downstream 2000 false Chr5: 18419985-18421984 Arabidopsis thaliana
AT5G45470 5.0kb upstream 5.0kb upstream 8058 true Chr5: 18421985-18430042 Arabidopsis thaliana
AT5G45470 5.0kb upstream 5.0kb upstream 5000 false Chr5: 18425043-18430042 Arabidopsis thaliana
AT5G45470 5.0kb downstream 5.0kb downstream 8058 true Chr5: 18416985-18425042 Arabidopsis thaliana
AT5G45470 5.0kb downstream 5.0kb downstream 5000 false Chr5: 18416985-18421984 Arabidopsis thaliana
AT5G45470 10.0kb upstream 10.0kb upstream 13058 true Chr5: 18421985-18435042 Arabidopsis thaliana
AT5G45470 10.0kb upstream 10.0kb upstream 10000 false Chr5: 18425043-18435042 Arabidopsis thaliana
AT5G45470 10.0kb downstream 10.0kb downstream 13058 true Chr5: 18411985-18425042 Arabidopsis thaliana
AT5G45470 10.0kb downstream 10.0kb downstream 10000 false Chr5: 18411985-18421984 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029142 5273 Angiosperm View MSA
122370606 5261 Brassicaceae View MSA
123840817 5264 Brassicales-Malvales View MSA
124349984 5266 SBM View MSA
124254475 5268 Malvidae View MSA
124074186 5270 Rosid View MSA
123752826 5271 Pentapetalae View MSA
122795885 5272 Eudicot View MSA
121350539 5274 Embryophyte View MSA
123381781 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 30.686     High High
cufflinks 19.403        
cufflinks 18.917        
cufflinks 21.622        
cufflinks 19.613        
cufflinks 27.201        

0 Strain