Gene : AT5G47020 A. thaliana TAIR10
Genomic Order:  4090 Name:  ? AT5G47020
Secondary Identifier:  ? PAC:19666815
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G47020 0.5kb upstream 0.5kb upstream 9066 true Chr5: 19080958-19090023 Arabidopsis thaliana
AT5G47020 0.5kb upstream 0.5kb upstream 500 false Chr5: 19080958-19081457 Arabidopsis thaliana
AT5G47020 0.5kb downstream 0.5kb downstream 9066 true Chr5: 19081458-19090523 Arabidopsis thaliana
AT5G47020 0.5kb downstream 0.5kb downstream 500 false Chr5: 19090024-19090523 Arabidopsis thaliana
AT5G47020 1.0kb upstream 1.0kb upstream 9566 true Chr5: 19080458-19090023 Arabidopsis thaliana
AT5G47020 1.0kb upstream 1.0kb upstream 1000 false Chr5: 19080458-19081457 Arabidopsis thaliana
AT5G47020 1.0kb downstream 1.0kb downstream 9566 true Chr5: 19081458-19091023 Arabidopsis thaliana
AT5G47020 1.0kb downstream 1.0kb downstream 1000 false Chr5: 19090024-19091023 Arabidopsis thaliana
AT5G47020 2.0kb upstream 2.0kb upstream 10566 true Chr5: 19079458-19090023 Arabidopsis thaliana
AT5G47020 2.0kb upstream 2.0kb upstream 2000 false Chr5: 19079458-19081457 Arabidopsis thaliana
AT5G47020 2.0kb downstream 2.0kb downstream 10566 true Chr5: 19081458-19092023 Arabidopsis thaliana
AT5G47020 2.0kb downstream 2.0kb downstream 2000 false Chr5: 19090024-19092023 Arabidopsis thaliana
AT5G47020 5.0kb upstream 5.0kb upstream 13566 true Chr5: 19076458-19090023 Arabidopsis thaliana
AT5G47020 5.0kb upstream 5.0kb upstream 5000 false Chr5: 19076458-19081457 Arabidopsis thaliana
AT5G47020 5.0kb downstream 5.0kb downstream 13566 true Chr5: 19081458-19095023 Arabidopsis thaliana
AT5G47020 5.0kb downstream 5.0kb downstream 5000 false Chr5: 19090024-19095023 Arabidopsis thaliana
AT5G47020 10.0kb upstream 10.0kb upstream 18566 true Chr5: 19071458-19090023 Arabidopsis thaliana
AT5G47020 10.0kb upstream 10.0kb upstream 10000 false Chr5: 19071458-19081457 Arabidopsis thaliana
AT5G47020 10.0kb downstream 10.0kb downstream 18566 true Chr5: 19081458-19100023 Arabidopsis thaliana
AT5G47020 10.0kb downstream 10.0kb downstream 10000 false Chr5: 19090024-19100023 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371873 5261 Brassicaceae View MSA
123829539 5264 Brassicales-Malvales View MSA
124341127 5266 SBM View MSA
124236882 5268 Malvidae View MSA
124073287 5270 Rosid View MSA
123741641 5271 Pentapetalae View MSA
122787770 5272 Eudicot View MSA
122043442 5273 Angiosperm View MSA
121344544 5274 Embryophyte View MSA
123380062 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.619        
cufflinks 14.75        
cufflinks 14.12        
cufflinks 16.997       High
cufflinks 14.502        
cufflinks 16.259        

0 Strain