Gene : AGD9 A. thaliana TAIR10
Primary Identifier:  ? AT5G46750 Defline:  (1 of 3) K12493 - ADP-ribosylation factor GTPase-activating protein 2/3 (ARFGAP2_3)
Genomic Order:  4057 Name:  ? AT5G46750
Secondary Identifier:  ? PAC:19665801
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G46750 0.5kb upstream 0.5kb upstream 2684 true Chr5: 18969749-18972432 Arabidopsis thaliana
AT5G46750 0.5kb upstream 0.5kb upstream 500 false Chr5: 18971933-18972432 Arabidopsis thaliana
AT5G46750 0.5kb downstream 0.5kb downstream 2684 true Chr5: 18969249-18971932 Arabidopsis thaliana
AT5G46750 0.5kb downstream 0.5kb downstream 500 false Chr5: 18969249-18969748 Arabidopsis thaliana
AT5G46750 1.0kb upstream 1.0kb upstream 3184 true Chr5: 18969749-18972932 Arabidopsis thaliana
AT5G46750 1.0kb upstream 1.0kb upstream 1000 false Chr5: 18971933-18972932 Arabidopsis thaliana
AT5G46750 1.0kb downstream 1.0kb downstream 3184 true Chr5: 18968749-18971932 Arabidopsis thaliana
AT5G46750 1.0kb downstream 1.0kb downstream 1000 false Chr5: 18968749-18969748 Arabidopsis thaliana
AT5G46750 2.0kb upstream 2.0kb upstream 4184 true Chr5: 18969749-18973932 Arabidopsis thaliana
AT5G46750 2.0kb upstream 2.0kb upstream 2000 false Chr5: 18971933-18973932 Arabidopsis thaliana
AT5G46750 2.0kb downstream 2.0kb downstream 4184 true Chr5: 18967749-18971932 Arabidopsis thaliana
AT5G46750 2.0kb downstream 2.0kb downstream 2000 false Chr5: 18967749-18969748 Arabidopsis thaliana
AT5G46750 5.0kb upstream 5.0kb upstream 7184 true Chr5: 18969749-18976932 Arabidopsis thaliana
AT5G46750 5.0kb upstream 5.0kb upstream 5000 false Chr5: 18971933-18976932 Arabidopsis thaliana
AT5G46750 5.0kb downstream 5.0kb downstream 7184 true Chr5: 18964749-18971932 Arabidopsis thaliana
AT5G46750 5.0kb downstream 5.0kb downstream 5000 false Chr5: 18964749-18969748 Arabidopsis thaliana
AT5G46750 10.0kb upstream 10.0kb upstream 12184 true Chr5: 18969749-18981932 Arabidopsis thaliana
AT5G46750 10.0kb upstream 10.0kb upstream 10000 false Chr5: 18971933-18981932 Arabidopsis thaliana
AT5G46750 10.0kb downstream 10.0kb downstream 12184 true Chr5: 18959749-18971932 Arabidopsis thaliana
AT5G46750 10.0kb downstream 10.0kb downstream 10000 false Chr5: 18959749-18969748 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026503 5273 Angiosperm View MSA
122374300 5261 Brassicaceae View MSA
123838332 5264 Brassicales-Malvales View MSA
124337756 5266 SBM View MSA
124239014 5268 Malvidae View MSA
124068773 5270 Rosid View MSA
123737800 5271 Pentapetalae View MSA
122787189 5272 Eudicot View MSA
121347869 5274 Embryophyte View MSA
123428144 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 28.573        
cufflinks 24.053        
cufflinks 20.542       Low
cufflinks 28.875        
cufflinks 23.434        
cufflinks 31.413     High High

0 Strain