Gene : AT5G46550 A. thaliana TAIR10
Defline:  (1 of 2) PTHR22880//PTHR22880:SF153 - FALZ-RELATED BROMODOMAIN-CONTAINING PROTEINS // TRANSCRIPTION FACTOR GTE11-RELATED Genomic Order:  4037
Name:  ? AT5G46550 Secondary Identifier:  ? PAC:19669598
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G46550 0.5kb upstream 0.5kb upstream 3131 true Chr5: 18884309-18887439 Arabidopsis thaliana
AT5G46550 0.5kb upstream 0.5kb upstream 500 false Chr5: 18886940-18887439 Arabidopsis thaliana
AT5G46550 0.5kb downstream 0.5kb downstream 3131 true Chr5: 18883809-18886939 Arabidopsis thaliana
AT5G46550 0.5kb downstream 0.5kb downstream 500 false Chr5: 18883809-18884308 Arabidopsis thaliana
AT5G46550 1.0kb upstream 1.0kb upstream 3631 true Chr5: 18884309-18887939 Arabidopsis thaliana
AT5G46550 1.0kb upstream 1.0kb upstream 1000 false Chr5: 18886940-18887939 Arabidopsis thaliana
AT5G46550 1.0kb downstream 1.0kb downstream 3631 true Chr5: 18883309-18886939 Arabidopsis thaliana
AT5G46550 1.0kb downstream 1.0kb downstream 1000 false Chr5: 18883309-18884308 Arabidopsis thaliana
AT5G46550 2.0kb upstream 2.0kb upstream 4631 true Chr5: 18884309-18888939 Arabidopsis thaliana
AT5G46550 2.0kb upstream 2.0kb upstream 2000 false Chr5: 18886940-18888939 Arabidopsis thaliana
AT5G46550 2.0kb downstream 2.0kb downstream 4631 true Chr5: 18882309-18886939 Arabidopsis thaliana
AT5G46550 2.0kb downstream 2.0kb downstream 2000 false Chr5: 18882309-18884308 Arabidopsis thaliana
AT5G46550 5.0kb upstream 5.0kb upstream 7631 true Chr5: 18884309-18891939 Arabidopsis thaliana
AT5G46550 5.0kb upstream 5.0kb upstream 5000 false Chr5: 18886940-18891939 Arabidopsis thaliana
AT5G46550 5.0kb downstream 5.0kb downstream 7631 true Chr5: 18879309-18886939 Arabidopsis thaliana
AT5G46550 5.0kb downstream 5.0kb downstream 5000 false Chr5: 18879309-18884308 Arabidopsis thaliana
AT5G46550 10.0kb upstream 10.0kb upstream 12631 true Chr5: 18884309-18896939 Arabidopsis thaliana
AT5G46550 10.0kb upstream 10.0kb upstream 10000 false Chr5: 18886940-18896939 Arabidopsis thaliana
AT5G46550 10.0kb downstream 10.0kb downstream 12631 true Chr5: 18874309-18886939 Arabidopsis thaliana
AT5G46550 10.0kb downstream 10.0kb downstream 10000 false Chr5: 18874309-18884308 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360772 5261 Brassicaceae View MSA
123840539 5264 Brassicales-Malvales View MSA
124342740 5266 SBM View MSA
124242465 5268 Malvidae View MSA
124060921 5270 Rosid View MSA
123751846 5271 Pentapetalae View MSA
122796315 5272 Eudicot View MSA
122048835 5273 Angiosperm View MSA
123429103 5275 Viridiplantae View MSA
121311132 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.219        
cufflinks 9.533        
cufflinks 8.581        
cufflinks 10.202       High
cufflinks 6.895       Low
cufflinks 9.314        

0 Strain