Gene : KCO2 A. thaliana TAIR10
Primary Identifier:  ? AT5G46370 Defline:  (1 of 3) PTHR11003//PTHR11003:SF126 - POTASSIUM CHANNEL, SUBFAMILY K // POTASSIUM INWARD RECTIFIER (KIR)-LIKE CHANNEL 3-RELATED
Genomic Order:  4019 Name:  ? AT5G46370
Secondary Identifier:  ? PAC:19672696
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0 Pathways

Genomics

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G46370 0.5kb upstream 0.5kb upstream 2697 true Chr5: 18809576-18812272 Arabidopsis thaliana
AT5G46370 0.5kb upstream 0.5kb upstream 500 false Chr5: 18811773-18812272 Arabidopsis thaliana
AT5G46370 0.5kb downstream 0.5kb downstream 2697 true Chr5: 18809076-18811772 Arabidopsis thaliana
AT5G46370 0.5kb downstream 0.5kb downstream 500 false Chr5: 18809076-18809575 Arabidopsis thaliana
AT5G46370 1.0kb upstream 1.0kb upstream 3197 true Chr5: 18809576-18812772 Arabidopsis thaliana
AT5G46370 1.0kb upstream 1.0kb upstream 1000 false Chr5: 18811773-18812772 Arabidopsis thaliana
AT5G46370 1.0kb downstream 1.0kb downstream 3197 true Chr5: 18808576-18811772 Arabidopsis thaliana
AT5G46370 1.0kb downstream 1.0kb downstream 1000 false Chr5: 18808576-18809575 Arabidopsis thaliana
AT5G46370 2.0kb upstream 2.0kb upstream 4197 true Chr5: 18809576-18813772 Arabidopsis thaliana
AT5G46370 2.0kb upstream 2.0kb upstream 2000 false Chr5: 18811773-18813772 Arabidopsis thaliana
AT5G46370 2.0kb downstream 2.0kb downstream 4197 true Chr5: 18807576-18811772 Arabidopsis thaliana
AT5G46370 2.0kb downstream 2.0kb downstream 2000 false Chr5: 18807576-18809575 Arabidopsis thaliana
AT5G46370 5.0kb upstream 5.0kb upstream 7197 true Chr5: 18809576-18816772 Arabidopsis thaliana
AT5G46370 5.0kb upstream 5.0kb upstream 5000 false Chr5: 18811773-18816772 Arabidopsis thaliana
AT5G46370 5.0kb downstream 5.0kb downstream 7197 true Chr5: 18804576-18811772 Arabidopsis thaliana
AT5G46370 5.0kb downstream 5.0kb downstream 5000 false Chr5: 18804576-18809575 Arabidopsis thaliana
AT5G46370 10.0kb upstream 10.0kb upstream 12197 true Chr5: 18809576-18821772 Arabidopsis thaliana
AT5G46370 10.0kb upstream 10.0kb upstream 10000 false Chr5: 18811773-18821772 Arabidopsis thaliana
AT5G46370 10.0kb downstream 10.0kb downstream 12197 true Chr5: 18799576-18811772 Arabidopsis thaliana
AT5G46370 10.0kb downstream 10.0kb downstream 10000 false Chr5: 18799576-18809575 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364185 5261 Brassicaceae View MSA
123798703 5264 Brassicales-Malvales View MSA
124296307 5266 SBM View MSA
124254547 5268 Malvidae View MSA
124050731 5270 Rosid View MSA
123750198 5271 Pentapetalae View MSA
122794614 5272 Eudicot View MSA
122044650 5273 Angiosperm View MSA
121350558 5274 Embryophyte View MSA
123381790 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.007     Low Low
cufflinks 0.753        
cufflinks 0.029     Low  
cufflinks 0.92        
cufflinks 0.207     Low  
cufflinks 1.597        

0 Strain