Gene : AT5G48660 A. thaliana TAIR10
Defline:  (1 of 2) PTHR12701//PTHR12701:SF13 - BCR-ASSOCIATED PROTEIN, BAP // B-CELL RECEPTOR-ASSOCIATED PROTEIN 31-LIKE PROTEIN Genomic Order:  4273
Name:  ? AT5G48660 Secondary Identifier:  ? PAC:19669556
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G48660 0.5kb upstream 0.5kb upstream 2392 true Chr5: 19736147-19738538 Arabidopsis thaliana
AT5G48660 0.5kb upstream 0.5kb upstream 500 false Chr5: 19736147-19736646 Arabidopsis thaliana
AT5G48660 0.5kb downstream 0.5kb downstream 2392 true Chr5: 19736647-19739038 Arabidopsis thaliana
AT5G48660 0.5kb downstream 0.5kb downstream 500 false Chr5: 19738539-19739038 Arabidopsis thaliana
AT5G48660 1.0kb upstream 1.0kb upstream 2892 true Chr5: 19735647-19738538 Arabidopsis thaliana
AT5G48660 1.0kb upstream 1.0kb upstream 1000 false Chr5: 19735647-19736646 Arabidopsis thaliana
AT5G48660 1.0kb downstream 1.0kb downstream 2892 true Chr5: 19736647-19739538 Arabidopsis thaliana
AT5G48660 1.0kb downstream 1.0kb downstream 1000 false Chr5: 19738539-19739538 Arabidopsis thaliana
AT5G48660 2.0kb upstream 2.0kb upstream 3892 true Chr5: 19734647-19738538 Arabidopsis thaliana
AT5G48660 2.0kb upstream 2.0kb upstream 2000 false Chr5: 19734647-19736646 Arabidopsis thaliana
AT5G48660 2.0kb downstream 2.0kb downstream 3892 true Chr5: 19736647-19740538 Arabidopsis thaliana
AT5G48660 2.0kb downstream 2.0kb downstream 2000 false Chr5: 19738539-19740538 Arabidopsis thaliana
AT5G48660 5.0kb upstream 5.0kb upstream 6892 true Chr5: 19731647-19738538 Arabidopsis thaliana
AT5G48660 5.0kb upstream 5.0kb upstream 5000 false Chr5: 19731647-19736646 Arabidopsis thaliana
AT5G48660 5.0kb downstream 5.0kb downstream 6892 true Chr5: 19736647-19743538 Arabidopsis thaliana
AT5G48660 5.0kb downstream 5.0kb downstream 5000 false Chr5: 19738539-19743538 Arabidopsis thaliana
AT5G48660 10.0kb upstream 10.0kb upstream 11892 true Chr5: 19726647-19738538 Arabidopsis thaliana
AT5G48660 10.0kb upstream 10.0kb upstream 10000 false Chr5: 19726647-19736646 Arabidopsis thaliana
AT5G48660 10.0kb downstream 10.0kb downstream 11892 true Chr5: 19736647-19748538 Arabidopsis thaliana
AT5G48660 10.0kb downstream 10.0kb downstream 10000 false Chr5: 19738539-19748538 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364285 5261 Brassicaceae View MSA
123828924 5264 Brassicales-Malvales View MSA
124336658 5266 SBM View MSA
124247766 5268 Malvidae View MSA
124068026 5270 Rosid View MSA
123742154 5271 Pentapetalae View MSA
122792321 5272 Eudicot View MSA
122041590 5273 Angiosperm View MSA
121347866 5274 Embryophyte View MSA
123426905 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.327        
cufflinks 12.28        
cufflinks 4.851        
cufflinks 8.094        
cufflinks 2.892       Low
cufflinks 12.268        

0 Strain