Gene : AT5G50570 A. thaliana TAIR10
Defline:  (1 of 2) PTHR31251//PTHR31251:SF20 - FAMILY NOT NAMED // SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 13A-RELATED Genomic Order:  4482
Name:  ? AT5G50570 Secondary Identifier:  ? PAC:19670856
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G50570 0.5kb upstream 0.5kb upstream 2977 true Chr5: 20582083-20585059 Arabidopsis thaliana
AT5G50570 0.5kb upstream 0.5kb upstream 500 false Chr5: 20584560-20585059 Arabidopsis thaliana
AT5G50570 0.5kb downstream 0.5kb downstream 2977 true Chr5: 20581583-20584559 Arabidopsis thaliana
AT5G50570 0.5kb downstream 0.5kb downstream 500 false Chr5: 20581583-20582082 Arabidopsis thaliana
AT5G50570 1.0kb upstream 1.0kb upstream 3477 true Chr5: 20582083-20585559 Arabidopsis thaliana
AT5G50570 1.0kb upstream 1.0kb upstream 1000 false Chr5: 20584560-20585559 Arabidopsis thaliana
AT5G50570 1.0kb downstream 1.0kb downstream 3477 true Chr5: 20581083-20584559 Arabidopsis thaliana
AT5G50570 1.0kb downstream 1.0kb downstream 1000 false Chr5: 20581083-20582082 Arabidopsis thaliana
AT5G50570 2.0kb upstream 2.0kb upstream 4477 true Chr5: 20582083-20586559 Arabidopsis thaliana
AT5G50570 2.0kb upstream 2.0kb upstream 2000 false Chr5: 20584560-20586559 Arabidopsis thaliana
AT5G50570 2.0kb downstream 2.0kb downstream 4477 true Chr5: 20580083-20584559 Arabidopsis thaliana
AT5G50570 2.0kb downstream 2.0kb downstream 2000 false Chr5: 20580083-20582082 Arabidopsis thaliana
AT5G50570 5.0kb upstream 5.0kb upstream 7477 true Chr5: 20582083-20589559 Arabidopsis thaliana
AT5G50570 5.0kb upstream 5.0kb upstream 5000 false Chr5: 20584560-20589559 Arabidopsis thaliana
AT5G50570 5.0kb downstream 5.0kb downstream 7477 true Chr5: 20577083-20584559 Arabidopsis thaliana
AT5G50570 5.0kb downstream 5.0kb downstream 5000 false Chr5: 20577083-20582082 Arabidopsis thaliana
AT5G50570 10.0kb upstream 10.0kb upstream 12477 true Chr5: 20582083-20594559 Arabidopsis thaliana
AT5G50570 10.0kb upstream 10.0kb upstream 10000 false Chr5: 20584560-20594559 Arabidopsis thaliana
AT5G50570 10.0kb downstream 10.0kb downstream 12477 true Chr5: 20572083-20584559 Arabidopsis thaliana
AT5G50570 10.0kb downstream 10.0kb downstream 10000 false Chr5: 20572083-20582082 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367645 5261 Brassicaceae View MSA
123834528 5264 Brassicales-Malvales View MSA
124339898 5266 SBM View MSA
124246215 5268 Malvidae View MSA
124071884 5270 Rosid View MSA
123752325 5271 Pentapetalae View MSA
122795767 5272 Eudicot View MSA
122050333 5273 Angiosperm View MSA
123428908 5275 Viridiplantae View MSA
121351727 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.005     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain