Gene : PPOX A. thaliana TAIR10
Primary Identifier:  ? AT5G49970 Defline:  (1 of 1) 1.4.3.5//5.1.99.6 - Pyridoxal 5'-phosphate synthase / Pyridoxine (pyridoxamine)phosphate oxidase // NAD(P)H-hydrate epimerase / NAD(P)HX epimerase
Genomic Order:  4411 Name:  ? AT5G49970
Secondary Identifier:  ? PAC:19671695
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3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PLPSAL-PWY Arabidopsis thaliana pathologic  
Athaliana PWY-6938 Arabidopsis thaliana pathologic  
Athaliana PWY-7204 Arabidopsis thaliana pathologic  

Genomics

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G49970 0.5kb upstream 0.5kb upstream 4469 true Chr5: 20328687-20333155 Arabidopsis thaliana
AT5G49970 0.5kb upstream 0.5kb upstream 500 false Chr5: 20328687-20329186 Arabidopsis thaliana
AT5G49970 0.5kb downstream 0.5kb downstream 4469 true Chr5: 20329187-20333655 Arabidopsis thaliana
AT5G49970 0.5kb downstream 0.5kb downstream 500 false Chr5: 20333156-20333655 Arabidopsis thaliana
AT5G49970 1.0kb upstream 1.0kb upstream 4969 true Chr5: 20328187-20333155 Arabidopsis thaliana
AT5G49970 1.0kb upstream 1.0kb upstream 1000 false Chr5: 20328187-20329186 Arabidopsis thaliana
AT5G49970 1.0kb downstream 1.0kb downstream 4969 true Chr5: 20329187-20334155 Arabidopsis thaliana
AT5G49970 1.0kb downstream 1.0kb downstream 1000 false Chr5: 20333156-20334155 Arabidopsis thaliana
AT5G49970 2.0kb upstream 2.0kb upstream 5969 true Chr5: 20327187-20333155 Arabidopsis thaliana
AT5G49970 2.0kb upstream 2.0kb upstream 2000 false Chr5: 20327187-20329186 Arabidopsis thaliana
AT5G49970 2.0kb downstream 2.0kb downstream 5969 true Chr5: 20329187-20335155 Arabidopsis thaliana
AT5G49970 2.0kb downstream 2.0kb downstream 2000 false Chr5: 20333156-20335155 Arabidopsis thaliana
AT5G49970 5.0kb upstream 5.0kb upstream 8969 true Chr5: 20324187-20333155 Arabidopsis thaliana
AT5G49970 5.0kb upstream 5.0kb upstream 5000 false Chr5: 20324187-20329186 Arabidopsis thaliana
AT5G49970 5.0kb downstream 5.0kb downstream 8969 true Chr5: 20329187-20338155 Arabidopsis thaliana
AT5G49970 5.0kb downstream 5.0kb downstream 5000 false Chr5: 20333156-20338155 Arabidopsis thaliana
AT5G49970 10.0kb upstream 10.0kb upstream 13969 true Chr5: 20319187-20333155 Arabidopsis thaliana
AT5G49970 10.0kb upstream 10.0kb upstream 10000 false Chr5: 20319187-20329186 Arabidopsis thaliana
AT5G49970 10.0kb downstream 10.0kb downstream 13969 true Chr5: 20329187-20343155 Arabidopsis thaliana
AT5G49970 10.0kb downstream 10.0kb downstream 10000 false Chr5: 20333156-20343155 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362150 5261 Brassicaceae View MSA
123832623 5264 Brassicales-Malvales View MSA
124345777 5266 SBM View MSA
124239161 5268 Malvidae View MSA
124062248 5270 Rosid View MSA
123736621 5271 Pentapetalae View MSA
122791647 5272 Eudicot View MSA
122043003 5273 Angiosperm View MSA
121346013 5274 Embryophyte View MSA
123424546 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.0       High
cufflinks 5.257        
cufflinks 9.246        
cufflinks 5.479        
cufflinks 9.466        
cufflinks 4.877       Low

0 Strain